| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0212 |
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| Symbol | |
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| ID | 5537674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 261991 |
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| End bp | 263247 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892376 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_001430363 |
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| Protein GI | 156740234 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.521983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC CGATCAACAC ATCTATTCGC TCTCCCAACT ATGGGTCGCG CGGCGGGCGG
CCCATTTCGA TGATCGTCCT TCACGCGACG GCGGGGACAG CGCGCAGTGC GCTGGCATGG
CTGACCAACC CGGCGGCGCG TGTATCGGCG CACTACCTGA TCGATAAAGC CGGGCAGATC
TATCGCCTGG TGCCCGATGA ATACGCTGCC TGGCACGCCG GGCGCGCCGC CTGGCGTGGT
GAGACGGCGA TCAATGAGGT GTCGCTCGGC ATCGAACTTG AGAATGCCAA CAATGGGCGC
GATCCCTATC CAACGGCGCA ACTCAGCGCG CTGATCCGCC TGACCCGCGA AAAAGTCGCT
CAGTACCGCA TCGCGCCCGA CATGGTCGTG CGGCACCTGG ACGTCGCCGT TCCGCGGGGG
CGCAAAAACG ATCCGGCCGG CTTTCCCTGG ACTGAATTTC TGCAACACAT CTTTGCCGAA
ACAACCATTG CTGCGCCAGA TCGTCCAATT CCACCGTCCA GACGCGCCGC ACTCAACCAG
ATTCTGCTGA ACGAAGCATA CCGTCAGGTC GGCGCCGTCG AATGGCCCGA CTGGGCAATG
ACCCGCGCGG CGCGCCTGGC AAAACTTGGG TTGCCGGTTG CGCCGTCGTT CGAGGTAACC
GTTGAAGGGC GCAATTACAT CGGGCAGTCG TTTGGATGCG AGACGCTGGT TAGCCCAATT
GCCGAATGGA AGCGCGTCGA CCGCCTGAGC GCACTGACGG CGCCCGAACA TCAACCGCTC
CGCGAGGCGC TGTTGCAGGC TATCTACGCG CAGGCAGGCG AGACATATCG ACCAGATTGG
GCATTTCACC AGTATGCGCT GCGCGAGCCG GTCGGACCAC CGCTGAGCGC CAGTTTCCGG
GTGCGTGTTG GCAATGAGGA GTGGTCAGCG GCGATCTATG CGCTCGATGT GCTGTACAGC
CCGGTCGGAC GCTGGAAAGA AATTGGTCGC CTGAGTGCGC TGATCGAAGC ACGCGGCGAA
CGCGACCCGT TGGCGGAGGC GTTGCTGGAA CGGCTCTATG AACGGGCTGG CAGCCAGTGG
CGCCCGATGT GGCCCTCTCA GCAGTATGCG CTCCGGGAAC GCCTGGGGGC GCCACTCGGA
CCCAGTTTCC GCGTGTCGTT CGACGGACGC GACTACGTGG CGGAAGCATT CGCTCTCGAT
GTGCTCTACT GCGCCATCGG CGAATGGGAC AACGTGCAGC GGCTGAGTGA GCGGTGA
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| Protein sequence | MTVPINTSIR SPNYGSRGGR PISMIVLHAT AGTARSALAW LTNPAARVSA HYLIDKAGQI
YRLVPDEYAA WHAGRAAWRG ETAINEVSLG IELENANNGR DPYPTAQLSA LIRLTREKVA
QYRIAPDMVV RHLDVAVPRG RKNDPAGFPW TEFLQHIFAE TTIAAPDRPI PPSRRAALNQ
ILLNEAYRQV GAVEWPDWAM TRAARLAKLG LPVAPSFEVT VEGRNYIGQS FGCETLVSPI
AEWKRVDRLS ALTAPEHQPL REALLQAIYA QAGETYRPDW AFHQYALREP VGPPLSASFR
VRVGNEEWSA AIYALDVLYS PVGRWKEIGR LSALIEARGE RDPLAEALLE RLYERAGSQW
RPMWPSQQYA LRERLGAPLG PSFRVSFDGR DYVAEAFALD VLYCAIGEWD NVQRLSER
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