| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3381 |
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| Symbol | |
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| ID | 8545769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4676946 |
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| End bp | 4678913 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646388048 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_003267776 |
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| Protein GI | 262196567 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.26749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.167867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAGA TTTGGATCGC AGGGGTGGGT TTCGACGTCG ACGCGCGGGT CATTCGCTGG
GACGAGGGGC CGGGTTACAA CGGCATGGCG CACGCATGCA TCAACCCGAG CCACCCCTGC
CCCGACGGGG TCAAACCGTT CTCGGAGAAG GCCAAGAACA CGCGCCCCAA CCGCTACGCG
CTGCGCCCCT CGCTGCGCCG CTACGGCGAG TCACCGCCGC TCGAGGCGGT GCAGAACTCC
ATCCGCCAGT TCATCGTGCA CCACGACGGC TGCCCCAGCG CCAAGGTGTG CTTCAACGTG
CTGCACAACG AGCGCGGGCT GTCGTGTCAC TTCCTGATGG ACAACGACGG CACCATCTAC
CAGACCATGG ACCTGTCGCT GATGGCGTAT CACGCGGCCG GGTTCAACGC GCGCTCCATC
GGCATCGAGA TCTGCAACCG CGGCGACGCC AAGCGCGACC CCAACTACTA CAGCAAGAAG
GGCCAGAAAC GCGAAGCCAC GACCGTGCGC ATCCACGGCC ACGTGTACAA GTGCTTCCGC
TTCACGCCGC AGCAGATCGA GGCCATGCAG GCGCTGTCGC AGGGCATCAG CCGGGCGCTG
CCCAACCTGC CGCTCGAGTA TCCCCAGGAC CAGCCCGGGC AGCAGGCCTG GGGCGAGATC
CCCAACGCGG CGCAGTTCGC CGGCATCCTC GGCCACTACC ACACCACCCG CCGCAAGTGG
GATCCCGGGC CCTTCGACTT CAAGGAGCTG TGCGAGAAGT CGCGCGGCTC GCTGTGCTTC
CCCATCTTCG TCAAGAAGCA GGAGCGCAGC AGCGACCGCC CCGTCGTGCC CGAGGACAGC
GAGTCGCTCG AGGAGATCAC GCGGGCGATG TACGATCTCA ACGAGAAGCA GAGCGAGGGC
GGCTATTTCC CGGTCGGCCC CGAGGCCCAG GAGAACGAGA CCCGGCTGTG GCACGGCGGC
GTGCACCTGC CGGGCACGTT CAAGCAGCCG GTGTTCGCGC CCTTCCCGGC CCGTCTGCTG
GCCGCGCGCA TGGGCCCCGA TACCGCGGTG GGCAGCGCCA ACTTCGCGCT GCTGCGCCAC
GACATGACCG TGGGCACGGG CTCGATCCGC TTCTACTCGC TGTATTTCCA TCTCGCCGAC
GAGAGCGGCG AGAGCGGCGA CGAGGGGCCA GTGTGGCTAG CCTCGGAGGC CTGGCAAGCG
GGCAAGGCGC CGGGCAAGGT GGTGCTGCTC AACGAGCCCA TCGAGGGCGG CGCCGTCATC
GGCCGCTACG GTCAGGGCGG TCCCATCGGC TATCGCCAGC CGCAGATCCA CTTCGGCATC
TTCGCCACCG AGGAGATCAT CTCGGTGGTG CAGCCCGAGA CCAGTCAGCT CCTGCGCGAG
CACTGGCAGA TCATCGACGG CACCCTGGGC GGGCGCTTCA GCAACGCCGA GGTGGTCAAC
GACCTCATCG ACACCAGCCC CAAGGACGGC AAGATCAGCC GCAGCGAGCT CTTGGATTTC
TTCCGCTCGC AGAGCGAGCG CAAGCTCACG CGCAACATGG CCGTGCTCAG CCAGTCGGAG
TGGACGGGCA CGCCCGATAG CTGGGTCTCG GACCTGATGC GCGCGCCCGA GTTCGCCGAC
CTGGGCGAGC GCGCGGTGCG CGACCTGGTC GAGGAGCAGG TGGCGCCGAC GCTGTGGTGG
AACGAGTCGC TGGCGCAGCA CGCCAAGCTG CCGCGCGACG GCGTGGTCTA CCACTACCAC
CCGCTGTCGT TCATCCGCTT CATCAACAAC AAGCGGCTGC AGGCGCAGTC GCTCAACGTC
GGTATCGGCG ACTTTCCCGA GTCCGACGCC AAAGAGCCGC CGCCCGGGGT CACCGATGAT
TTCGGCGATG TCGACGGCGA CTCCTTCGTC GACGATGCCG AGCTCGCCGG CGAGATCTTC
GACCCCGATA TCCCGCTCGA AGAGCTGATC AAAGGATTTC CCGAATGA
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| Protein sequence | MSKIWIAGVG FDVDARVIRW DEGPGYNGMA HACINPSHPC PDGVKPFSEK AKNTRPNRYA
LRPSLRRYGE SPPLEAVQNS IRQFIVHHDG CPSAKVCFNV LHNERGLSCH FLMDNDGTIY
QTMDLSLMAY HAAGFNARSI GIEICNRGDA KRDPNYYSKK GQKREATTVR IHGHVYKCFR
FTPQQIEAMQ ALSQGISRAL PNLPLEYPQD QPGQQAWGEI PNAAQFAGIL GHYHTTRRKW
DPGPFDFKEL CEKSRGSLCF PIFVKKQERS SDRPVVPEDS ESLEEITRAM YDLNEKQSEG
GYFPVGPEAQ ENETRLWHGG VHLPGTFKQP VFAPFPARLL AARMGPDTAV GSANFALLRH
DMTVGTGSIR FYSLYFHLAD ESGESGDEGP VWLASEAWQA GKAPGKVVLL NEPIEGGAVI
GRYGQGGPIG YRQPQIHFGI FATEEIISVV QPETSQLLRE HWQIIDGTLG GRFSNAEVVN
DLIDTSPKDG KISRSELLDF FRSQSERKLT RNMAVLSQSE WTGTPDSWVS DLMRAPEFAD
LGERAVRDLV EEQVAPTLWW NESLAQHAKL PRDGVVYHYH PLSFIRFINN KRLQAQSLNV
GIGDFPESDA KEPPPGVTDD FGDVDGDSFV DDAELAGEIF DPDIPLEELI KGFPE
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