12 homologs were found in PanDaTox collection
for query gene TM1040_2827 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_2827  hypothetical protein  100 
 
 		 439 aa  847    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_3417  hypothetical protein  31.74 
 
 		 475 aa  115  1.0000000000000001e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2912  hypothetical protein  49.25 
 
 		 429 aa  113  7.000000000000001e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0303561  normal  0.177657 
 
 
-
 
NC_007802  Jann_4082  hypothetical protein  33.16 
 
 		 468 aa  111  3e-23  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.431831 
 
 
-
 
NC_007493  RSP_6207  hypothetical protein  38.46 
 
 		 433 aa  99.4  1e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.143416  n/a   
 
 
-
 
NC_009049  Rsph17029_0159  hypothetical protein  38.46 
 
 		 433 aa  99.4  1e-19  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.53716  normal  0.993204 
 
 
-
 
NC_008686  Pden_1996  hypothetical protein  36.44 
 
 		 523 aa  85.1  0.000000000000003  Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.00622478  normal  1 
 
 
-
 
NC_008254  Meso_3200  putative phage tail protein  30.47 
 
 		 478 aa  67.8  0.0000000004  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_4147  hypothetical protein  29.43 
 
 		 461 aa  62.4  0.00000001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_2968  hypothetical protein  33.33 
 
 		 462 aa  57  0.0000007  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_0734  hypothetical protein  31.42 
 
 		 768 aa  45.8  0.002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_0120  hypothetical protein  45.61 
 
 		 313 aa  43.9  0.006  Caulobacter sp. K31  Bacteria  normal  0.954008  normal  1 
 
 
-
 
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