Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2968 |
Symbol | |
ID | 5323845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3114373 |
End bp | 3115761 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640791919 |
Product | hypothetical protein |
Protein accession | YP_001328632 |
Protein GI | 150398165 |
COG category | [S] Function unknown |
COG ID | [COG4223] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAC GACGGGGTGT GCCTGCTGCA GGTCCGCTCC GGCGAGGCCG TCAGGCAAAA AGGCGGTCCA ATAGGCAAAC TTATGAGGTG ACCATGGCAT CGGAAAAGCC GCCGCGCCGC TCGAAAGCTG GAAAAGAACC GCTGACGATC GATCTCGAGG CGGAGAAAAC CGCGTCCGCG CAGACCGAAG CCACCGCTGA CGGGGAAGCC GCACCCAGCC AGCCGGTGGA CATGCCGCCG AGCGAGGCGG CGGCAGCCGG TGAAGCAGGC ACCGGCGGCG CCCGAAGCCG CGAAGGCGGC ACCGGCGAAC CTCCATTGCC GGCAGGCGAT CCGCAAGAGG AAACGGAAGA GGCACGGGCA GATGCCGCCG CTGCCGCTTT CGACGAGAAG CTTCCGCATT CGAGCAGCGG CGAAATGCCT GAGCCGAAGA GGAGGCAGAC TGCGGGTGCA GGCGCGCTTG CAGCCGGCAT TCTCGGCGGC CTCGTCGCGC TCGCCGGTGC CGGCGTGTTG CAATATGCCG GCTACATTCC TGCGCCCGGA CCTGAGCGGC CTGGCACCGA GCAGAACCTT GCGGGCGAAA TCGAAGCGAT AAAGGCCGAG CTCCGGGCTC AGGCTCCGGC GGCACCAGTC GACGTCGCCC CGCTGGAAAA CCGCCTTGCC GCCCTGGAAA ATGCGGCGCG GGAGCCCGGC GCTGATGCGG AGGGCTCGCC TGAGGTCAAA TCGCTCGAAG CCGAGGTCGC CAATCTGACG ACCGAAATCG CCACGCTCAA AACGGAGCTT GCCGAAACCC GCCAGGCGGC CGACGCCGCT CGAGCAGAGC TTGCCGGCCG TATCGACCAG GCGGAACAAA AGCTCAACGA GCCGGCAAAC GACATCGATA TGGCGAAAGC CGTCGCGGTG ACGGCACTGA AGACGGCGAT CGATCGCGGC GGGCCGTTCC TCGCAGAACT CGACGCCCTG CGCAGCATCG CGCCCGACGA TCCGGCGGTC AAGGAACTGG CGGCTGTAGC CGCAACGGGG GTCGCCACGC GCGCGGCTCT CCGGGATAGC TTCCAGCCGG CGGCCGACGC GATGCTGAAT GCGCTGCAGC AGCCCGATCC CAACCAAGGG ATCTTCGATC GCCTCGTCTC CAGCGCCATG TCGGGGATCC GTGTTCGGCC GGTCGGCAGC GTCGAGGGCG ACACGCCGGA AGCGGTGATC GCACGCATCG AGGACAAGCT CGACAATGGC GATCTCAAGG GCGCATCGCT CGAATGGAAC AGCCTTCCCG AGGCGGCGAG ATCAGCCGGC CAGAAATTCA AGGAGAAGCT TGACCGGCGG CTCAACGTGG AAACGGTGAT CGATGCCGCC GTCGCCGGGA CCATGGTTCG AACCGGTACA CAAGGTTAG
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Protein sequence | MLKRRGVPAA GPLRRGRQAK RRSNRQTYEV TMASEKPPRR SKAGKEPLTI DLEAEKTASA QTEATADGEA APSQPVDMPP SEAAAAGEAG TGGARSREGG TGEPPLPAGD PQEETEEARA DAAAAAFDEK LPHSSSGEMP EPKRRQTAGA GALAAGILGG LVALAGAGVL QYAGYIPAPG PERPGTEQNL AGEIEAIKAE LRAQAPAAPV DVAPLENRLA ALENAAREPG ADAEGSPEVK SLEAEVANLT TEIATLKTEL AETRQAADAA RAELAGRIDQ AEQKLNEPAN DIDMAKAVAV TALKTAIDRG GPFLAELDAL RSIAPDDPAV KELAAVAATG VATRAALRDS FQPAADAMLN ALQQPDPNQG IFDRLVSSAM SGIRVRPVGS VEGDTPEAVI ARIEDKLDNG DLKGASLEWN SLPEAARSAG QKFKEKLDRR LNVETVIDAA VAGTMVRTGT QG
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