7 homologs were found in PanDaTox collection
for query gene Swit_2008 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_2008  hypothetical protein  100 
 
 
166 aa  339  1e-92  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0276  hypothetical protein  32.85 
 
 
157 aa  67  0.0000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.669813  normal  0.188863 
 
 
-
 
NC_009511  Swit_0288  hypothetical protein  33.13 
 
 
167 aa  58.5  0.00000004  Sphingomonas wittichii RW1  Bacteria  normal  0.133197  normal  0.680109 
 
 
-
 
NC_009511  Swit_3644  hypothetical protein  31.21 
 
 
171 aa  52  0.000003  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.64826 
 
 
-
 
NC_009921  Franean1_0629  hypothetical protein  27.56 
 
 
182 aa  46.6  0.0001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.873986 
 
 
-
 
NC_009511  Swit_2262  hypothetical protein  32.1 
 
 
177 aa  45.8  0.0003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3461  hypothetical protein  30.39 
 
 
177 aa  43.9  0.001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
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