Gene Swit_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0288 
Symbol 
ID5197837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp305011 
End bp305514 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content69% 
IMG OID640579828 
Producthypothetical protein 
Protein accessionYP_001260797 
Protein GI148553215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.133197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.680109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGAGA CGGAGATGCG CAACCTGCTC GGCGGCACGT TCCACCAGAT CGCCTATGTC 
ACCGCCGACT TCGACGCGGG GCTGGCGGCG CTGCGCGCCG GCCATGGCAT CGAGCGCTTC
CTGGAGCTGC GCGACATCCG CTTTCCGGTC GATCGGGCGG GCGCCGAGGC GCATTGCCAT
ATCGCGCTCG GGCGGACCGG TGGGCTGGAG ATCGAGCTGA TCCAGCCGCT CGGCGGCGCG
GCCGACCTCT ATCGCGAGCC GCTCGACCGG CCGGGCCCGC TGCACTTCCA CCATGTCGCG
CAGCGGGTCG ACACGCTCGC CGAGCTGGAG GCGCTGCACC GGACCGCGAG GGAGCGCGGC
TTCGCGATCC CGATCGATTC CGAATCCAAC GGCATGACCT ATTTCTACGC CGACGCGCGC
GCGACGCTCG GCCATCATGT CGAATATATC TACGGCTCGC CCGACTATTG GGCGGCGGTC
GGGGCGATGA TCCCGGAGAA TTGA
 
Protein sequence
MKETEMRNLL GGTFHQIAYV TADFDAGLAA LRAGHGIERF LELRDIRFPV DRAGAEAHCH 
IALGRTGGLE IELIQPLGGA ADLYREPLDR PGPLHFHHVA QRVDTLAELE ALHRTARERG
FAIPIDSESN GMTYFYADAR ATLGHHVEYI YGSPDYWAAV GAMIPEN