Gene Swit_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2008 
Symbol 
ID5200154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2247831 
End bp2248331 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID640581552 
Producthypothetical protein 
Protein accessionYP_001262505 
Protein GI148554923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCT TCGACCGCCA TGCGACGATC TTCCAGCTCG GCTACGTCAC CGACGACCTC 
GACCATGCGC TGGCCGGTTT CCGGGGCCTC GGCGTCGAAC GCTTCCGCAT CAACCAGGTC
GGCGCGGCGG CCGGCCTCTC CTCGCCGCAT GGCGCGCGGA TCGCGATGGC CTGGGCGGGC
GACGTGATGA TCGAGGTGAT CGAGCCCCAA GGCGTCCCCG CGCCGGTCTA TGTCGACGAC
CTCCCGCCGC CGGGATCGCG CCGCTGCGTC TTCAACCATG TCGGCCTCGC GGTGCCGGAT
CATGCCGCAT GGCAAGCGCT GCGCGCCGAG CTCGACCGGC GCGGCCTGCC CATCGCCTGG
CACGGCTCGA ATCCGGCGCA GTTCGACGTC GCCTATGTCG ATACCCGCCC GCTGACGGGC
CATTACAGCG AGTTCATCCG CGTCTGCCCG GTGCTGGCCG AGATGTTCGC GAGCGTTCCC
AGGAATGGAG AAAAGCGATG A
 
Protein sequence
MGIFDRHATI FQLGYVTDDL DHALAGFRGL GVERFRINQV GAAAGLSSPH GARIAMAWAG 
DVMIEVIEPQ GVPAPVYVDD LPPPGSRRCV FNHVGLAVPD HAAWQALRAE LDRRGLPIAW
HGSNPAQFDV AYVDTRPLTG HYSEFIRVCP VLAEMFASVP RNGEKR