13 homologs were found in PanDaTox collection
for query gene Spea_2399 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_2399  hypothetical protein  100 
 
 
226 aa  468  1.0000000000000001e-131  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00252121  n/a   
 
 
-
 
NC_008321  Shewmr4_1472  hypothetical protein  62.79 
 
 
233 aa  296  2e-79  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00176011  normal 
 
 
-
 
NC_009665  Shew185_3418  hypothetical protein  50.93 
 
 
235 aa  238  4e-62  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3023  hypothetical protein  44.86 
 
 
226 aa  193  2e-48  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01542  hypothetical protein  31.31 
 
 
236 aa  112  4.0000000000000004e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3018  hypothetical protein  33.12 
 
 
238 aa  76.3  0.0000000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02487  hypothetical protein  24 
 
 
230 aa  62.8  0.000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010172  Mext_3386  hypothetical protein  33.33 
 
 
446 aa  52  0.000008  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.742104 
 
 
-
 
NC_011757  Mchl_3695  hypothetical protein  33.33 
 
 
445 aa  51.6  0.000009  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.555947 
 
 
-
 
NC_009485  BBta_1104  hypothetical protein  31.46 
 
 
268 aa  51.2  0.00001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.720924  normal  0.156334 
 
 
-
 
NC_007958  RPD_2194  hypothetical protein  26.81 
 
 
273 aa  50.4  0.00002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.988772  normal  0.764817 
 
 
-
 
NC_007778  RPB_3275  hypothetical protein  31.76 
 
 
273 aa  46.6  0.0003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.523463 
 
 
-
 
NC_010511  M446_4663  hypothetical protein  33.87 
 
 
481 aa  44.7  0.001  Methylobacterium sp. 4-46  Bacteria  normal  0.320364  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>