Gene Shewmr4_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1472 
Symbol 
ID4252050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1722426 
End bp1723127 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content38% 
IMG OID638118071 
Producthypothetical protein 
Protein accessionYP_733607 
Protein GI113969814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00176011 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGA CTATATTTTT CACCTTGTTT TTTGTCGCGT TTTCTAATGC CAGTGCAGAA 
GAACAAACCC AAGTTAACTT AAAAGATAAT ACGGTTTTCT ATGAGGGAGC ACTCTCTAAG
GAAGCCAATC AAAAACTTAT CTCATTGATT GATAACAATC CTCACCAAAT CGAGTGGGTA
TCAATTAAAA GCAAGGGAGG TGAAGTCAAT CGAGGAATGG ATTTAGGCGA GATTATTTTT
AACAATAATC TTGGCGTCGA GGTTACCGAA TACTGTCTAT CTTCTTGTGC TAATTATGTA
TTCTCTTCAG CTCATAAGCG CCGTATATCC AATCATGCTG TTATTGGTTT TCATGGCGGT
GTCACTGGGA TGGAGGAAGC AACGGAAGAA TACCTAAAAA CTTTACCCGA GAGCCAACAA
AAAGCAGCCA GAGATAGCTT CACCGCGTAT ATGAAGACAA CAACGTCCAG AGAAGCTGAG
TTTTTCACTA AGGTTGGTGT CAGTCAAAAA ATAACCTATT TAGGTCAAAG TCCCTTGTAT
CAAAAGCAAA ATGATTCTGA AGAGAACATT GGCTGGTACT ATTCATTAGA TGACTTAACA
AAGCTCGGTA TAAAAAACAT CACGGTAATT AACCCGCCTT GGAAATTCAA ACAACTATCC
GAAAAAACCA AGTTCTTTAA AGTGAGTGTG AGTGATATTT GA
 
Protein sequence
MRKTIFFTLF FVAFSNASAE EQTQVNLKDN TVFYEGALSK EANQKLISLI DNNPHQIEWV 
SIKSKGGEVN RGMDLGEIIF NNNLGVEVTE YCLSSCANYV FSSAHKRRIS NHAVIGFHGG
VTGMEEATEE YLKTLPESQQ KAARDSFTAY MKTTTSREAE FFTKVGVSQK ITYLGQSPLY
QKQNDSEENI GWYYSLDDLT KLGIKNITVI NPPWKFKQLS EKTKFFKVSV SDI