Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1472 |
Symbol | |
ID | 4252050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1722426 |
End bp | 1723127 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638118071 |
Product | hypothetical protein |
Protein accession | YP_733607 |
Protein GI | 113969814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00176011 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGA CTATATTTTT CACCTTGTTT TTTGTCGCGT TTTCTAATGC CAGTGCAGAA GAACAAACCC AAGTTAACTT AAAAGATAAT ACGGTTTTCT ATGAGGGAGC ACTCTCTAAG GAAGCCAATC AAAAACTTAT CTCATTGATT GATAACAATC CTCACCAAAT CGAGTGGGTA TCAATTAAAA GCAAGGGAGG TGAAGTCAAT CGAGGAATGG ATTTAGGCGA GATTATTTTT AACAATAATC TTGGCGTCGA GGTTACCGAA TACTGTCTAT CTTCTTGTGC TAATTATGTA TTCTCTTCAG CTCATAAGCG CCGTATATCC AATCATGCTG TTATTGGTTT TCATGGCGGT GTCACTGGGA TGGAGGAAGC AACGGAAGAA TACCTAAAAA CTTTACCCGA GAGCCAACAA AAAGCAGCCA GAGATAGCTT CACCGCGTAT ATGAAGACAA CAACGTCCAG AGAAGCTGAG TTTTTCACTA AGGTTGGTGT CAGTCAAAAA ATAACCTATT TAGGTCAAAG TCCCTTGTAT CAAAAGCAAA ATGATTCTGA AGAGAACATT GGCTGGTACT ATTCATTAGA TGACTTAACA AAGCTCGGTA TAAAAAACAT CACGGTAATT AACCCGCCTT GGAAATTCAA ACAACTATCC GAAAAAACCA AGTTCTTTAA AGTGAGTGTG AGTGATATTT GA
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Protein sequence | MRKTIFFTLF FVAFSNASAE EQTQVNLKDN TVFYEGALSK EANQKLISLI DNNPHQIEWV SIKSKGGEVN RGMDLGEIIF NNNLGVEVTE YCLSSCANYV FSSAHKRRIS NHAVIGFHGG VTGMEEATEE YLKTLPESQQ KAARDSFTAY MKTTTSREAE FFTKVGVSQK ITYLGQSPLY QKQNDSEENI GWYYSLDDLT KLGIKNITVI NPPWKFKQLS EKTKFFKVSV SDI
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