10 homologs were found in PanDaTox collection
for query gene Smed_4424 on replicon NC_009620
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009620  Smed_4424  calcium-binding EF-hand-containing protein  100 
 
 		 160 aa  321  3e-87  Sinorhizobium medicae WSM419  Bacteria  normal  0.163959  normal  0.98941 
 
 
-
 
NC_008254  Meso_2277  calcium-binding EF-hand  60.61 
 
 		 155 aa  81.3  0.000000000000005  Chelativorans sp. BNC1  Bacteria  normal  0.677939  n/a   
 
 
-
 
NC_011894  Mnod_0833  Calcium-binding EF-hand-containing protein  64 
 
 		 135 aa  77.8  0.00000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0359291  n/a   
 
 
-
 
NC_011366  Rleg2_5866  hypothetical protein  63.27 
 
 		 137 aa  74.3  0.0000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.91114  normal  1 
 
 
-
 
NC_010511  M446_0152  signal transduction protein  58 
 
 		 140 aa  70.5  0.000000000009  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0847  calcium-binding EF-hand  49.3 
 
 		 185 aa  65.5  0.0000000003  Chelativorans sp. BNC1  Bacteria  normal  0.547407  n/a   
 
 
-
 
NC_010682  Rpic_3389  putative signal transduction protein with EFhand domain  36.92 
 
 		 205 aa  48.9  0.00003  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3042  putative signal transduction protein with EFhand domain protein  36.92 
 
 		 205 aa  48.1  0.00005  Ralstonia pickettii 12D  Bacteria  normal  0.6189  normal  1 
 
 
-
 
NC_010717  PXO_04241  EF hand domain protein  44.68 
 
 		 113 aa  43.9  0.0008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc3104  putative calcium binding signal peptide protein  41.51 
 
 		 194 aa  42  0.003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.801881  normal  1 
 
 
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