10 homologs were found in PanDaTox collection
for query gene Sked_27080 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_27080  looped-hinge helix DNA binding domain, AbrB family  100 
 
 		 117 aa  231  2.0000000000000002e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.674959 
 
 
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NC_014151  Cfla_3057  transcriptional regulator, AbrB family  67.57 
 
 		 111 aa  110  6e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.000185512 
 
 
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NC_009943  Dole_1697  AbrB family transcriptional regulator  41.86 
 
 		 82 aa  47  0.00009  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.311866  n/a   
 
 
-
 
NC_008392  Bamb_5677  AbrB family transcriptional regulator  44.68 
 
 		 81 aa  46.2  0.0002  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.482694 
 
 
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NC_010512  Bcenmc03_6993  AbrB family transcriptional regulator  47.62 
 
 		 81 aa  43.5  0.001  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0781681 
 
 
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NC_008009  Acid345_4673  AbrB family transcriptional regulator  47.37 
 
 		 131 aa  42.4  0.002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.109325 
 
 
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NC_011060  Ppha_1276  transcriptional regulator, AbrB family  37.21 
 
 		 82 aa  42  0.003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_007644  Moth_0687  AbrB family transcriptional regulator  27.94 
 
 		 92 aa  41.6  0.004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000068736  unclonable  0.00000000733097 
 
 
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NC_010831  Cphamn1_1154  transcriptional regulator, AbrB family  39.02 
 
 		 89 aa  41.6  0.004  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.134363  normal  0.0192222 
 
 
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NC_009012  Cthe_1619  AbrB family transcriptional regulator  35.09 
 
 		 90 aa  40.4  0.008  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
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