Gene Cthe_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1619 
Symbol 
ID4809314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1951335 
End bp1951607 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content50% 
IMG OID640107035 
ProductAbrB family transcriptional regulator 
Protein accessionYP_001038036 
Protein GI125974126 
COG category 
COG ID 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTC CCATAGTTGA TAATGCAAAG GTAATGGCAA AAGGCCAGAT CACGCTGCCA 
AAAGATATCC GCTCCAAACT TCGCCTTTCC ACCGGAGACC GCGTCACCCT CATTTGCGAG
GAAGACCGGG TTATCCTTAT GAACTCCGCT GTCTACGCCA TGAAAATGCT ACAGAAAGAA
ATGGAGGGCG AAGCGGAAAA AGCCGGGATC CGCAATGATG ACGATGTTAT GGATCTGGTG
AAGGACGTCC GCGCGGAGAT TGAAGGTCTA TGA
 
Protein sequence
MNVPIVDNAK VMAKGQITLP KDIRSKLRLS TGDRVTLICE EDRVILMNSA VYAMKMLQKE 
MEGEAEKAGI RNDDDVMDLV KDVRAEIEGL