Gene Sked_27080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27080 
Symbol 
ID8634342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3020424 
End bp3020777 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content68% 
IMG OID 
Productlooped-hinge helix DNA binding domain, AbrB family 
Protein accessionYP_003315446 
Protein GI269795991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.674959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAACCT CGCATGCCTT GTCATCATCT TTCGCCACTG TCAACGCGCA GGGTCGCATC 
GTCGTGCCTG CAGGGGTTCG CCAGGCCCTC GGCATCGCCA GCGGCGACCG GGTGGAGTTC
CTCGTCGACG AGACAGGAGT CCGGCTGATC ACGCCCCGCA TGCGAGCGAT GACGTTGTGG
GCGAAGAACC ACGGTGGAGA CGCCGGAGAC TCGACCCGCG CTGTGCGTGC GTCCCGCTCG
GACGACCAGC GCACAGCCTC CGAGGCAGAG CAGCGCGTCG CCGACCGCGT CGCTGCGGAG
ACTCGGGACC ACGACGAGAT GGCGGCTGTC CTCTTCGCCG ATCTCGGCCT GTGA
 
Protein sequence
MSTSHALSSS FATVNAQGRI VVPAGVRQAL GIASGDRVEF LVDETGVRLI TPRMRAMTLW 
AKNHGGDAGD STRAVRASRS DDQRTASEAE QRVADRVAAE TRDHDEMAAV LFADLGL