12 homologs were found in PanDaTox collection
for query gene Shewmr4_3890 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008321  Shewmr4_3890  capsule biosynthesis phosphatase  100 
 
 		 133 aa  271  2.0000000000000002e-72  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_4094  capsule biosynthesis phosphatase  98.41 
 
 		 126 aa  253  4e-67  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.875104 
 
 
-
 
NC_009457  VC0395_A2612  hypothetical protein  71.2 
 
 		 126 aa  198  1.9999999999999998e-50  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_0108  hypothetical protein  65.55 
 
 		 124 aa  180  7e-45  Shewanella amazonensis SB2B  Bacteria  normal  0.930749  normal  0.0145062 
 
 
-
 
NC_009707  JJD26997_1802  capsule biosynthesis phosphatase  62.9 
 
 		 132 aa  163  6.9999999999999995e-40  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A0731  hypothetical protein  49.59 
 
 		 132 aa  131  3e-30  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_0422  hypothetical protein  46.34 
 
 		 156 aa  128  2.0000000000000002e-29  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1662  hypothetical protein  48.74 
 
 		 134 aa  122  2e-27  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_012039  Cla_0300  capsular polysaccharide biosynthesis protein  65.75 
 
 		 81 aa  108  3e-23  Campylobacter lari RM2100  Bacteria  normal  0.0248181  n/a   
 
 
-
 
NC_007577  PMT9312_1341  CMP-N-acetylneuraminic acid synthetase-like  38.24 
 
 		 347 aa  52.8  0.000001  Prochlorococcus marinus str. MIT 9312  Bacteria  decreased coverage  0.00519164  n/a   
 
 
-
 
NC_007577  PMT9312_1347  phosphoheptose isomerase  35.64 
 
 		 302 aa  43.1  0.001  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.19661  n/a   
 
 
-
 
NC_007577  PMT9312_1331  hypothetical protein  30.69 
 
 		 127 aa  41.6  0.003  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.0108039  n/a   
 
 
-
 
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