Gene PMT9312_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1341 
Symbol 
ID3766151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1256857 
End bp1257900 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content25% 
IMG OID637797872 
ProductCMP-N-acetylneuraminic acid synthetase-like 
Protein accessionYP_397837 
Protein GI78779725 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00519164 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG TTCTCGGATT TATACCCTGC AGATCAGGTT CAAAAAGAAT AAAAAATAAA 
AATCTTCTTA CATTTAATTC GAAGTCTCTC ATACAAAATG TTTATGATTT TGCCGAATTA
TCTAAAAGTA TAGATGACAT TGTAGTATCA ACAGATTCTT CAGATTATTT AAATAGTTTT
AGCAAAAAGG GTAAATTTAT AGATATTGGG TTAAGATCAA AGAAAAATTC AACTGATAAA
TCAACTGATA TTGATGTTTT AAAAGAAGTT ATTCAAAAAT TAAAAATAAA AGGATTTGAT
TATAAATATG TTATTCACTT AAGACCAACT TATCCAGCAA TTTCCGAAAA AAATATTGAT
GATGCATATA AATTACTTTT ATTAAATGAA AGAGCAACTA GCTTAAAAAG TGTTGAAAAA
CTAGATTTGT TTTATCAGAA ATGTTTAATA GAAGATGATG AAGATTCGTC AAGATTAATT
GGACTTGATA ATGATATTTT TAATATTTCA TCATCAATGC CCTCTCAAAA ATGCAAAAAT
ATTTATGCCC AAACGGCAGC TCTGGATATT TATAAAATCG AAAATATATT ATCTGGAAAT
TTATGGGGAA GTTATTGTTT AAAATATGAA TTTGGTAATG TGAATGCTGA TATAGATGAA
TATTTTGATT TGCCTCATGC ATATAGTGCA CTAGATCAAT TAGATGTTTT TAATAATAAA
AAGAAGGGAA AACAATATGA AATATGTTTT GATATTGATG GACTTCTTTT TTCAAGAACT
TCAGATGGAA ATTACTCTAA TGCAATTCCC AATAAAGGAG CTATTGAAAT TTTATCTAAA
TTAAAAAATA AAGGATTTGT AATTATTTTA CAAACCGCAA GAGGTACTAA AACTGGAAAG
AATTGGTTTG AAGTAACAAA AAAACAACTA GAAAATAATA ATGTACCTTA TGACAAATTA
ATTTTCAAAA AACCTGGCTC AGATTTTTAT GTAGATGACC GTTTTATATC TTTAAGGAGA
TTAAAAAAGA TTTTCAATAT TTAA
 
Protein sequence
MSKVLGFIPC RSGSKRIKNK NLLTFNSKSL IQNVYDFAEL SKSIDDIVVS TDSSDYLNSF 
SKKGKFIDIG LRSKKNSTDK STDIDVLKEV IQKLKIKGFD YKYVIHLRPT YPAISEKNID
DAYKLLLLNE RATSLKSVEK LDLFYQKCLI EDDEDSSRLI GLDNDIFNIS SSMPSQKCKN
IYAQTAALDI YKIENILSGN LWGSYCLKYE FGNVNADIDE YFDLPHAYSA LDQLDVFNNK
KKGKQYEICF DIDGLLFSRT SDGNYSNAIP NKGAIEILSK LKNKGFVIIL QTARGTKTGK
NWFEVTKKQL ENNNVPYDKL IFKKPGSDFY VDDRFISLRR LKKIFNI