Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3890 |
Symbol | |
ID | 4254453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4640869 |
End bp | 4641270 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638120535 |
Product | capsule biosynthesis phosphatase |
Protein accession | YP_736010 |
Protein GI | 113972217 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01681] HAD-superfamily phosphatase, subfamily IIIC [TIGR01689] capsule biosynthesis phosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTAC TTGGAGTTAA TGTGAAAAAA TTAATTGTCG ATTTGGACGG AACTATTACA CTAGCGAATA CTACTGACTA TGAAAAAGTT TTACCTAACA CAGCGTTAAT TGAGAAACTT AAAGAATATA AAACCTCTGG ATTTAGCATT GTAATTGCAA CAGCAAGGAA TATGCGAACA TACGATGGAA ACATTGGAAA AATCAACATA CATACTTTAC CAAAAATAAT AAAGTGGCTA GATAAACATG AAGTTCCTTA TGATGAAATT ATAGTAGGAA AGCCCTGGTG TGGTAATGAT GGATTTTATA TTGATGATAA AGCTATTCGC CCATCTGAGT TTTTAAGCAT GGATTTAAGT GAAATAAAAA GTCTACTAAA CAAGGAAAAT ATATGTTTTT AA
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Protein sequence | MRVLGVNVKK LIVDLDGTIT LANTTDYEKV LPNTALIEKL KEYKTSGFSI VIATARNMRT YDGNIGKINI HTLPKIIKWL DKHEVPYDEI IVGKPWCGND GFYIDDKAIR PSEFLSMDLS EIKSLLNKEN ICF
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