Gene Shewmr4_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3890 
Symbol 
ID4254453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4640869 
End bp4641270 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content31% 
IMG OID638120535 
Productcapsule biosynthesis phosphatase 
Protein accessionYP_736010 
Protein GI113972217 
COG category 
COG ID 
TIGRFAM ID[TIGR01681] HAD-superfamily phosphatase, subfamily IIIC
[TIGR01689] capsule biosynthesis phosphatase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAC TTGGAGTTAA TGTGAAAAAA TTAATTGTCG ATTTGGACGG AACTATTACA 
CTAGCGAATA CTACTGACTA TGAAAAAGTT TTACCTAACA CAGCGTTAAT TGAGAAACTT
AAAGAATATA AAACCTCTGG ATTTAGCATT GTAATTGCAA CAGCAAGGAA TATGCGAACA
TACGATGGAA ACATTGGAAA AATCAACATA CATACTTTAC CAAAAATAAT AAAGTGGCTA
GATAAACATG AAGTTCCTTA TGATGAAATT ATAGTAGGAA AGCCCTGGTG TGGTAATGAT
GGATTTTATA TTGATGATAA AGCTATTCGC CCATCTGAGT TTTTAAGCAT GGATTTAAGT
GAAATAAAAA GTCTACTAAA CAAGGAAAAT ATATGTTTTT AA
 
Protein sequence
MRVLGVNVKK LIVDLDGTIT LANTTDYEKV LPNTALIEKL KEYKTSGFSI VIATARNMRT 
YDGNIGKINI HTLPKIIKWL DKHEVPYDEI IVGKPWCGND GFYIDDKAIR PSEFLSMDLS
EIKSLLNKEN ICF