16 homologs were found in PanDaTox collection
for query gene Shewmr4_3647 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_3647  hypothetical protein  100 
 
 
305 aa  613  9.999999999999999e-175  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000449942  normal 
 
 
-
 
NC_008577  Shewana3_3843  hypothetical protein  94.75 
 
 
303 aa  572  1.0000000000000001e-162  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00510604  normal 
 
 
-
 
NC_008322  Shewmr7_0297  hypothetical protein  95.7 
 
 
305 aa  551  1e-156  Shewanella sp. MR-7  Bacteria  normal  0.320086  normal 
 
 
-
 
NC_004347  SO_0326  hypothetical protein  59.81 
 
 
307 aa  323  3e-87  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_4065  hypothetical protein  50.16 
 
 
278 aa  258  1e-67  Shewanella baltica OS155  Bacteria  normal  0.0398586  n/a   
 
 
-
 
NC_009665  Shew185_4040  hypothetical protein  50.32 
 
 
278 aa  256  2e-67  Shewanella baltica OS185  Bacteria  normal  0.747352  n/a   
 
 
-
 
NC_011663  Sbal223_3963  hypothetical protein  50.16 
 
 
278 aa  256  2e-67  Shewanella baltica OS223  Bacteria  normal  0.0268812  normal 
 
 
-
 
NC_009997  Sbal195_4158  hypothetical protein  49.52 
 
 
278 aa  256  4e-67  Shewanella baltica OS195  Bacteria  decreased coverage  0.00164338  normal 
 
 
-
 
NC_009438  Sputcn32_3661  hypothetical protein  48.17 
 
 
293 aa  243  1.9999999999999999e-63  Shewanella putrefaciens CN-32  Bacteria  decreased coverage  0.00533969  n/a   
 
 
-
 
NC_008345  Sfri_0405  hypothetical protein  34.34 
 
 
315 aa  149  4e-35  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0143721  n/a   
 
 
-
 
NC_010506  Swoo_0396  hypothetical protein  37.58 
 
 
273 aa  141  1.9999999999999998e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  0.967914  normal 
 
 
-
 
NC_009901  Spea_0306  hypothetical protein  36.93 
 
 
280 aa  136  5e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  0.129036  n/a   
 
 
-
 
NC_009092  Shew_0260  hypothetical protein  55.56 
 
 
282 aa  135  9.999999999999999e-31  Shewanella loihica PV-4  Bacteria  unclonable  0.0000000397247  normal  0.0163156 
 
 
-
 
NC_007954  Sden_0281  hypothetical protein  46.84 
 
 
263 aa  133  3.9999999999999996e-30  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000000108782  n/a   
 
 
-
 
NC_009831  Ssed_4197  hypothetical protein  48.95 
 
 
291 aa  124  2e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.495069  normal 
 
 
-
 
NC_008700  Sama_3325  hypothetical protein  50 
 
 
266 aa  122  9.999999999999999e-27  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000609082  normal 
 
 
-
 
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