Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3647 |
Symbol | |
ID | 4254211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4357232 |
End bp | 4358149 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120290 |
Product | hypothetical protein |
Protein accession | YP_735768 |
Protein GI | 113971975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000449942 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCG TTGTCGTTTT TATACTGATC GCTATCGGAG TGTTTTTATT TCGTCGTGCC CAGCGCTTGG CGAAGGAAGA GCAAGAGGCA ATGATGGCGA AAAAATCAAC CGAAAAGACA AGGGATACAA GCGCTTCGCC CGATGAGGCT GAATCTACGC CTGACCTTGC TCCTTCTGCG ACGAACGAGT CAACCGCCGC CGCTGCGGCC AAAGCGCCCG AGGTTGAATT AATGCCAAGG GACGTTGAGC CAGCGAGCCG TGTTGAGCTG AGCGAAGATA TTATCGACGT TGAGATCCCT GCTGCTACCC ATGACGAGAA TGTAATTATT CTTGCAGATG TGCATTCTGC CGATGCCGAT AAAGACTCTG CAATCCCTGA GGATGACGTT TTGGTCACCC AGGCGAGTGA GGCTAAAGAA GATCCGGTAG TCGTCGGTGC TCCCGTTAAG GCTAAAGAAA GCGTCGAGAG TTCACCTGAG GTGGCAAGCA CTCCTCTGGC GAAAGATGAG CCGCTTGCAG CACTTGGTTC ATGGGCGAAT GTGACCCTAG AGCGCGCGGT AGAAGAATAC CAAAGTGCAG AGACTGCCTT GGCTCGCTAT AACGCCTTAC AAAACGTCAT AGCAGAGTGC TACAAGCAGC GCAAATCGAC GGAATATTTA GCCTATGGCG CAGCGCTACA TGGGCTGTAT CTTGCGTTAT TCCACAGTGC GAATACCGAA AAGCCCAAAG AGCTTGAGCT TAAAACCCCA GGTTTTATGC AGCTCGCGAC TTTGCTAAAC GATACCCAAG ACTTTGATAA AGCGATTGCA CTCTGCCAAG AGGCGATCAA ACTCGGTTTA ACCGATGGCA CTGTGACGGG GTTTGAAGGA CGAATTAGCC GTATCGAGAA GGCGCAGGCG AAAGCGGCGA TGGCCTAA
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Protein sequence | MKVVVVFILI AIGVFLFRRA QRLAKEEQEA MMAKKSTEKT RDTSASPDEA ESTPDLAPSA TNESTAAAAA KAPEVELMPR DVEPASRVEL SEDIIDVEIP AATHDENVII LADVHSADAD KDSAIPEDDV LVTQASEAKE DPVVVGAPVK AKESVESSPE VASTPLAKDE PLAALGSWAN VTLERAVEEY QSAETALARY NALQNVIAEC YKQRKSTEYL AYGAALHGLY LALFHSANTE KPKELELKTP GFMQLATLLN DTQDFDKAIA LCQEAIKLGL TDGTVTGFEG RISRIEKAQA KAAMA
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