Gene Shewmr4_3647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3647 
Symbol 
ID4254211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4357232 
End bp4358149 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content52% 
IMG OID638120290 
Producthypothetical protein 
Protein accessionYP_735768 
Protein GI113971975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000449942 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCG TTGTCGTTTT TATACTGATC GCTATCGGAG TGTTTTTATT TCGTCGTGCC 
CAGCGCTTGG CGAAGGAAGA GCAAGAGGCA ATGATGGCGA AAAAATCAAC CGAAAAGACA
AGGGATACAA GCGCTTCGCC CGATGAGGCT GAATCTACGC CTGACCTTGC TCCTTCTGCG
ACGAACGAGT CAACCGCCGC CGCTGCGGCC AAAGCGCCCG AGGTTGAATT AATGCCAAGG
GACGTTGAGC CAGCGAGCCG TGTTGAGCTG AGCGAAGATA TTATCGACGT TGAGATCCCT
GCTGCTACCC ATGACGAGAA TGTAATTATT CTTGCAGATG TGCATTCTGC CGATGCCGAT
AAAGACTCTG CAATCCCTGA GGATGACGTT TTGGTCACCC AGGCGAGTGA GGCTAAAGAA
GATCCGGTAG TCGTCGGTGC TCCCGTTAAG GCTAAAGAAA GCGTCGAGAG TTCACCTGAG
GTGGCAAGCA CTCCTCTGGC GAAAGATGAG CCGCTTGCAG CACTTGGTTC ATGGGCGAAT
GTGACCCTAG AGCGCGCGGT AGAAGAATAC CAAAGTGCAG AGACTGCCTT GGCTCGCTAT
AACGCCTTAC AAAACGTCAT AGCAGAGTGC TACAAGCAGC GCAAATCGAC GGAATATTTA
GCCTATGGCG CAGCGCTACA TGGGCTGTAT CTTGCGTTAT TCCACAGTGC GAATACCGAA
AAGCCCAAAG AGCTTGAGCT TAAAACCCCA GGTTTTATGC AGCTCGCGAC TTTGCTAAAC
GATACCCAAG ACTTTGATAA AGCGATTGCA CTCTGCCAAG AGGCGATCAA ACTCGGTTTA
ACCGATGGCA CTGTGACGGG GTTTGAAGGA CGAATTAGCC GTATCGAGAA GGCGCAGGCG
AAAGCGGCGA TGGCCTAA
 
Protein sequence
MKVVVVFILI AIGVFLFRRA QRLAKEEQEA MMAKKSTEKT RDTSASPDEA ESTPDLAPSA 
TNESTAAAAA KAPEVELMPR DVEPASRVEL SEDIIDVEIP AATHDENVII LADVHSADAD
KDSAIPEDDV LVTQASEAKE DPVVVGAPVK AKESVESSPE VASTPLAKDE PLAALGSWAN
VTLERAVEEY QSAETALARY NALQNVIAEC YKQRKSTEYL AYGAALHGLY LALFHSANTE
KPKELELKTP GFMQLATLLN DTQDFDKAIA LCQEAIKLGL TDGTVTGFEG RISRIEKAQA
KAAMA