Gene Swoo_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0396 
Symbol 
ID6114626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp493872 
End bp494693 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content48% 
IMG OID641631881 
Producthypothetical protein 
Protein accessionYP_001758790 
Protein GI170724764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.967914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA TATTAATTTT GTTACTCGTT TTTTTAGGCG TTTACCTTTA TATGCGAGCA 
AAACGACTGG CAGAAAAAGA GCAAGAAGTG GCTAAGCCAG TTGAGAAAGA GATCCACGAA
TCGACAGCTG TTGAGCAGAA AGCAGCAGAG GAGGTTAGCA TTGTAGATGT TGTTGATACC
TCTGTGGCTG ATAAGGTTGA GACCGTTGAG ACCGTTAAGG CGGATGTGAG CGACGAGCAG
AAACTAGATA CCGCGAACTC TGAGGCGACT CAAGATGAGG TGGCTATTGC TGTGGCTTTG
CCGGATGTTG ACCCTGCAGA GCCAGAGCCA GAGCCAGAGC CAGAGCCAGA GCCAGAGCCA
GAGCCAGAGC CAGAGCCAGA GCCAGAGCCA GAGCCAGAGC CAGAGCCAGA GCCAGAGCCA
GAGCCAGTTA GTGTTGCAAC CGATGAGTCA TGGGCGAATG CTAAATTAGC GGGTTCTTTG
AAAGAGTACC GTAGCTCATC GGATAGTGCG ATTCAGCACT CAGCGCTGCT TGCAGCCATT
GGTGAGTGTT ATAAACAGCG TAAACAAGCT GAATATGCAA ATTATGGTGC TGGATTAACA
CCAGAATATA TTGAGGTATT TGCATCGCTT AAGTCTCCGA CTAATGAGAA AGGGGTTGGC
TTTATGCACC TTTCTACCTT GCTTAACGAC ACGGGAATGT TCGATAAAGC CATTGAAGTG
TGTCAAAAAG CGATAACTTA TGGTTTGAGT GATGGCACTG TGACAGGGTT TGAGGGGCGC
ATTAGCCGTA TCGAGAAAGC CAAGGCCAAA GCAAACAAGT AA
 
Protein sequence
MKVILILLLV FLGVYLYMRA KRLAEKEQEV AKPVEKEIHE STAVEQKAAE EVSIVDVVDT 
SVADKVETVE TVKADVSDEQ KLDTANSEAT QDEVAIAVAL PDVDPAEPEP EPEPEPEPEP
EPEPEPEPEP EPEPEPEPEP EPVSVATDES WANAKLAGSL KEYRSSSDSA IQHSALLAAI
GECYKQRKQA EYANYGAGLT PEYIEVFASL KSPTNEKGVG FMHLSTLLND TGMFDKAIEV
CQKAITYGLS DGTVTGFEGR ISRIEKAKAK ANK