Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0396 |
Symbol | |
ID | 6114626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 493872 |
End bp | 494693 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631881 |
Product | hypothetical protein |
Protein accession | YP_001758790 |
Protein GI | 170724764 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.967914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTTA TATTAATTTT GTTACTCGTT TTTTTAGGCG TTTACCTTTA TATGCGAGCA AAACGACTGG CAGAAAAAGA GCAAGAAGTG GCTAAGCCAG TTGAGAAAGA GATCCACGAA TCGACAGCTG TTGAGCAGAA AGCAGCAGAG GAGGTTAGCA TTGTAGATGT TGTTGATACC TCTGTGGCTG ATAAGGTTGA GACCGTTGAG ACCGTTAAGG CGGATGTGAG CGACGAGCAG AAACTAGATA CCGCGAACTC TGAGGCGACT CAAGATGAGG TGGCTATTGC TGTGGCTTTG CCGGATGTTG ACCCTGCAGA GCCAGAGCCA GAGCCAGAGC CAGAGCCAGA GCCAGAGCCA GAGCCAGAGC CAGAGCCAGA GCCAGAGCCA GAGCCAGAGC CAGAGCCAGA GCCAGAGCCA GAGCCAGTTA GTGTTGCAAC CGATGAGTCA TGGGCGAATG CTAAATTAGC GGGTTCTTTG AAAGAGTACC GTAGCTCATC GGATAGTGCG ATTCAGCACT CAGCGCTGCT TGCAGCCATT GGTGAGTGTT ATAAACAGCG TAAACAAGCT GAATATGCAA ATTATGGTGC TGGATTAACA CCAGAATATA TTGAGGTATT TGCATCGCTT AAGTCTCCGA CTAATGAGAA AGGGGTTGGC TTTATGCACC TTTCTACCTT GCTTAACGAC ACGGGAATGT TCGATAAAGC CATTGAAGTG TGTCAAAAAG CGATAACTTA TGGTTTGAGT GATGGCACTG TGACAGGGTT TGAGGGGCGC ATTAGCCGTA TCGAGAAAGC CAAGGCCAAA GCAAACAAGT AA
|
Protein sequence | MKVILILLLV FLGVYLYMRA KRLAEKEQEV AKPVEKEIHE STAVEQKAAE EVSIVDVVDT SVADKVETVE TVKADVSDEQ KLDTANSEAT QDEVAIAVAL PDVDPAEPEP EPEPEPEPEP EPEPEPEPEP EPEPEPEPEP EPVSVATDES WANAKLAGSL KEYRSSSDSA IQHSALLAAI GECYKQRKQA EYANYGAGLT PEYIEVFASL KSPTNEKGVG FMHLSTLLND TGMFDKAIEV CQKAITYGLS DGTVTGFEGR ISRIEKAKAK ANK
|
| |