| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4197 |
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| Symbol | |
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| ID | 5611943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5154970 |
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| End bp | 5155845 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935156 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475929 |
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| Protein GI | 157377329 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.495069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATA TAGCCATTAT TTTGCTAGTT GCTTTAGGGG TTTATCTATA TAAACGAGCT
CAGCGACTGG CCGAAGAGGA ACTGCAACAG GATTTGAATA CTCCTGTTGA AAAAGAGATT
TTCGACAGCG CTTCAGCCGA AGATATTCAG GATGAGAGCC ATGCCTTTTC TGAGGACGCG
GCTAAGGCGG AAAAGGTTGA AGTTGCCGAG GTGGAGGAAG TCTCCACTCC GGCAGACGAG
GGGATCAGCT TCGAGACTAA AGAAGCGACT AAGGTACAGG CTGAGGTTGT AAAGAGTGAA
CCTGAGGCCG ATACTCCTGC AGAGCCAGAG CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG CCAGAGCCAG AGCCAGCCGT GGAGGAAACT
CCTGTGGTTG CCACAGATGA ATCTTGGGCG AATGCTAAGT TATCTCAAGC CCTGTCAGAT
TATCGAGGCT CTACCGGGAA AGCTGTTAAA CATCAGGCTT TATTGGGGGC GATTGCTGAA
TGTTATAAGC AACGCAAACA ACCTGAGTAC AGCGCATATG GGGCGGGATT AACGGCCGAA
TACCTATCGG TATTTGCAGA ACTCGAATCA CCATCTTCGG AGAAGGGGGT GGGCTTCATG
CATCTATCTA CACTTCTCAA TGATAATGGC CGGTTCGACA GTGCCATTGG CGTTTGCCTG
AAGGCGATCG AATATGGTGT GCTCGACGGT ACCGTTACCG GTTTCGAAGG GCGAATAATC
CGAATAGAAA AGGCCAAGGC CAAAGCGGCG AAGTAA
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| Protein sequence | MKYIAIILLV ALGVYLYKRA QRLAEEELQQ DLNTPVEKEI FDSASAEDIQ DESHAFSEDA
AKAEKVEVAE VEEVSTPADE GISFETKEAT KVQAEVVKSE PEADTPAEPE PEPEPEPEPE
PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE PEPEPAVEET PVVATDESWA NAKLSQALSD
YRGSTGKAVK HQALLGAIAE CYKQRKQPEY SAYGAGLTAE YLSVFAELES PSSEKGVGFM
HLSTLLNDNG RFDSAIGVCL KAIEYGVLDG TVTGFEGRII RIEKAKAKAA K
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