11 homologs were found in PanDaTox collection
for query gene Shew_3234 on replicon NC_009092
Organism: Shewanella loihica PV-4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_3234  hypothetical protein  100 
 
 		 283 aa  582  1.0000000000000001e-165  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_2914  cell surface receptor IPT/TIG domain protein  26.27 
 
 		 1035 aa  62.8  0.000000006  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2915  cell wall/surface repeat protein  23.76 
 
 		 1310 aa  49.7  0.00005  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_1976  hypothetical protein  26.34 
 
 		 1367 aa  46.2  0.0007  Methanococcoides burtonii DSM 6242  Archaea  unclonable  0.000800417  n/a   
 
 
-
 
NC_009486  Tpet_0642  LamG domain-containing protein  30.34 
 
 		 247 aa  44.3  0.002  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.0000110792  n/a   
 
 
-
 
NC_010483  TRQ2_0667  LamG domain-containing protein  30.34 
 
 		 247 aa  43.9  0.003  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3011  LamG domain-containing protein  26.28 
 
 		 4761 aa  43.1  0.005  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3871  laminin G, domain-containing 2  27.86 
 
 		 1159 aa  42.7  0.007  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_2086  beta-xylosidase-like protein  25.34 
 
 		 1121 aa  42.4  0.008  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00280414  decreased coverage  0.0000000469917 
 
 
-
 
NC_009486  Tpet_0640  hypothetical protein  30.68 
 
 		 250 aa  42.4  0.008  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00000266751  n/a   
 
 
-
 
NC_010483  TRQ2_0665  hypothetical protein  31.11 
 
 		 250 aa  42.4  0.008  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>