| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3871 |
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| Symbol | |
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| ID | 5210853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4841999 |
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| End bp | 4845478 |
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| Gene Length | 3480 bp |
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| Protein Length | 1159 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597466 |
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| Product | laminin G, domain-containing 2 |
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| Protein accession | YP_001278174 |
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| Protein GI | 148657969 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCG TAAGGTTGCC AGTTGCCTCA GTCATCGTGC TGGTCGTCGC CATTGCATCC
CTCATAGGTG TGACGTTGCT GCTGCCGGGC AACGTTGCGG CGCAGCAGGG ATACTCGCTG
CGTTTCTACG GAACCGGCGC TCGCGATGTG GATCGTGTCA AGATTCCGCT GGACGCCCCG
CATCGTTCTG TCGATGTTGG TGCGACTGAT TTTACAGTCG AGTTCTGGAT GCGAGCGCTG
CCGGGCGCCA ATGCCAGCGG TCCCTGCGTT GCCGGACAGG ACACGTGGAT CAACGGCAAC
ATCATGTTCG ACCGTGATAT CTTCGGCACA GGCGATTACG GAGACTATGG CATTTCACTC
TATGGCGGGC GCATCGCGTT CGGCGTTGCG ACATCGACTG CGAGCCGGAC AATCTGTGGT
GCGACGAATG TCGCCGATGG GCAATGGCAT CATATTGCCG TAACACGGCG CTCCAGCGAT
GGACAGTTGA GCATTTTTGT GGATGGAGTA CTTGATGGAC AGGCGCCCGG TCCGGTTGGC
AATATCAGTT ACCGGGATGG ACGCGCCGCG CAATGGCCCA ATGAGCCGTA CCTGGTCATC
GGCGCCGAAA AACATGACTA CGACCGCGTC GCCTATCCAT CATTCAATGG CTGGATCGAC
GAGGTGCGCA TTTCAAATAC GCTGCGATAT ACTGTATCAT TTGCCCGTCC AACGCAACCG
TTTACACCCG ATGCGTTGAC GGCTGCACTC TACCATTTCG ATGAAGGCGC CGGATTGATT
GTCAATGATA CATCCGGCGC GGTTGATGGA CCTGCCAACG GAACTCTCTT TGTTGATCCA
CTGTCAGGCG GTCCTGCATG GTCTGCAGAA ACGCCACCCT GGACAGGAAA TCCACCAACC
AGCACGCCCG CACCGACGGC GACCGATACG CCCGTGCCGA CGGCGACGAA CACGCCCGTG
CCGCCGACGG CGACGAATAC GCCTGTGCCG CCGATGGCGA CGAATACGCC TGTGCCGCCG
ATGGCGACGA ACACGCCCGT GCCGCCAACG GCGACGAACA CGCCCGTGCC GCCGACGGCG
ACCGATACGC CTGTGCCGCC GACGGCGACA AATACGCCCG TGCCGCCAAC AGTGACGAAT
ACGCCCACTG CCACGCCGGT TCCTCCCACG GCAACGCATA CACCGCTGCC AACGGCGACG
AACACGCCCG TGCCGCCGAC GGCGACCAAT ACGCCGCTGC CGACGGCGAC GAACACGCCC
GTGCCGCCGA CGGCGACGAA TACGCCTGTG CCGCCGACGG CGACCAATAC GCCGCTGCCG
ACGGCGACGA ACACGCCGCT GCTGCCGTCA AACAATGCGC TGCGCTTCGA CGGGGCGAAT
GATGAGGTGC GCGGCGGACT GCTCGCCGGA CTGGGCGGCG TGCAGACCAT CGAACTCTGG
GTGCGTCCGG CGACCGGCGG GCAGGATAGC GTCATCATCG CCCATGGCGA CGACGATTCT
GGTTGGGCGC TGGAACTGAA CGGCGGTCGC GCCACCTGGT GGGTCGCTTC GACCGCCGGC
TGGCGCGCGG CGCAACACCC GACGGCGCTG CTCGCCAATA CCTGGTACCA CATCGCCGTG
ACCTACGACG GCGCAACCGC GCGGGTGTTC GTTAATGGTT CATCCGGGTC GGCGGTGACC
ATCGGCGCGA TCACGCAGGG ACCGTTCCTG CGTATCGGTG GGCTGGCAGG GTACGGCTTC
TTCAACGGCG ACATCGATGA CGTGCGCATC TCGAATGTCG TGCGCTACAC CAGCACGTTT
ACACCGCCTT CAACAGCACA TCCGGCGGAT GCGAACACGC GCGCGCTTTA CCGGCTTGAT
GAAGGGAGCG GGCAAACCAC AGCAGATGCT TCGGGGAACG GGTATCACCT GACCCTCGGC
ACAACGGTGA ATGCTGACAG CGCCGATCCG ACGTGGGTGG CGTCAACCGC ACCGATTGCG
CCGCCGCCGA CGGCGACCAA TACGCCACTG CCGACGGCGA CCAATACGCC CGTGCCGCCG
ACGGCGACCA ACACGCCTGT GCCGCCGACG GCGACCAATA CGTCGCTGCC GACGGCGACC
AATACGCCCG TGCCGCCGAC GGCGACCAAC ACGCCTGTGC CGCCGACGGC GACCAATACG
CCCGTGCTGC CGACGGCGAC CAGTACGCCA CTGCCGACGG CGACCAACAC GCCTGTGCCG
CCGACGCCCA CGCTAACACC CACAGGCGAA GGTCCGGCAG AAAATCTGTT GCGGAACGGC
GGATTCGAAC TCGACGCCAA CGGCGATACA CGCCCCGATA ACTGGACGTC GAATACGCGC
GTGACCAGAA GCGCAGCAGT GGTGCGTAGC GGCAGTTATG CCATGCGGCA CTACGCGACT
GATAACGCAA ACTATACTAT TTCGCAGACC GTTGCGGGCG TAACTGCGGG GACGAACTAC
GTCCTTGTCG GTTACGTCAC CATTCCCCCC ACCAGTGACA CGTTCACGTT CAATGTGCGT
GTGCGCTGGC TGCGGTCCGA CAGTACGATC ATTCGCACCG ATACAGCGCG CAGTTTCACT
GGCAGCATCA GTGGATGGGA GATGGCACGC GGCGTCTATA CTGCGCCAGC TGGCGCCGTG
CAGGCGCGGG TCGAAATGAA TGTGTCCAGC CTGAATGCAA CGGTGTACGC TGACGATTTT
GCCTTCGGTC CTGTGTCGCC AACTGCAACG CCAACGAGCA CGTCCGTTCC GCCAACGGCG
ACGAACACTC CCGTGCCGCC AACGGCGACA CAGACCCCGG CATCACCGAC TGCAACCTCC
ACACCGTCGC CCACTGCCAG CGCCAACGGT GCACTGGCGT TTGACGGCGT CGATGACGAA
GCGGGCAACA CGGCATTTTC GATGAGCGGC GGATTTACGG TCGAAGCCTG GGTGCGTCCT
TCGAGCGGCA ATCAGAACTC GATTGTGATC GTCACCGGTG ATGGGTCACG CGGCTGGTCA
CTGGAACTCA ACGATGGTCG TGCAACACTG TGGGTTGCAA ACAACGCAGG CGCCTGGTCG
TTTGTTCGCA ATGATAGTGT CGTGTTGCAA GCCAATCAGT GGTACCACAT TGCAGCAACG
TATGAAAACG GCAATGCGCG CGTGTTTGTC AACGGCGTTG CGGGAACATC AGGGACGGTT
GGCGCAGTGA GTCACATGCC GGTCCTGCGC CTGGGCGGAT TGACTAGCTA CGGCTTCTTT
GCCGGTCAGA TCGACGACGT CCGCATCTCG CGGATCGTGC GGTACACGGG CAGCTTCACA
CCACCATCGA TGCCGCTGCC AGCGGATGCC AATACTATCG CGCTCTACCT CTTCGATGAA
GGGAGCGGGC AGACGGCGTA TGATGCGTCG GGGAACGGGT ATCATCTGAC GCTTGGACGA
AGCGCTGGCG TGGACAGCGC CGATCCGCAG CGCGTTGTAT CGAGTGCGCC GGGCAGATAA
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| Protein sequence | MRFVRLPVAS VIVLVVAIAS LIGVTLLLPG NVAAQQGYSL RFYGTGARDV DRVKIPLDAP
HRSVDVGATD FTVEFWMRAL PGANASGPCV AGQDTWINGN IMFDRDIFGT GDYGDYGISL
YGGRIAFGVA TSTASRTICG ATNVADGQWH HIAVTRRSSD GQLSIFVDGV LDGQAPGPVG
NISYRDGRAA QWPNEPYLVI GAEKHDYDRV AYPSFNGWID EVRISNTLRY TVSFARPTQP
FTPDALTAAL YHFDEGAGLI VNDTSGAVDG PANGTLFVDP LSGGPAWSAE TPPWTGNPPT
STPAPTATDT PVPTATNTPV PPTATNTPVP PMATNTPVPP MATNTPVPPT ATNTPVPPTA
TDTPVPPTAT NTPVPPTVTN TPTATPVPPT ATHTPLPTAT NTPVPPTATN TPLPTATNTP
VPPTATNTPV PPTATNTPLP TATNTPLLPS NNALRFDGAN DEVRGGLLAG LGGVQTIELW
VRPATGGQDS VIIAHGDDDS GWALELNGGR ATWWVASTAG WRAAQHPTAL LANTWYHIAV
TYDGATARVF VNGSSGSAVT IGAITQGPFL RIGGLAGYGF FNGDIDDVRI SNVVRYTSTF
TPPSTAHPAD ANTRALYRLD EGSGQTTADA SGNGYHLTLG TTVNADSADP TWVASTAPIA
PPPTATNTPL PTATNTPVPP TATNTPVPPT ATNTSLPTAT NTPVPPTATN TPVPPTATNT
PVLPTATSTP LPTATNTPVP PTPTLTPTGE GPAENLLRNG GFELDANGDT RPDNWTSNTR
VTRSAAVVRS GSYAMRHYAT DNANYTISQT VAGVTAGTNY VLVGYVTIPP TSDTFTFNVR
VRWLRSDSTI IRTDTARSFT GSISGWEMAR GVYTAPAGAV QARVEMNVSS LNATVYADDF
AFGPVSPTAT PTSTSVPPTA TNTPVPPTAT QTPASPTATS TPSPTASANG ALAFDGVDDE
AGNTAFSMSG GFTVEAWVRP SSGNQNSIVI VTGDGSRGWS LELNDGRATL WVANNAGAWS
FVRNDSVVLQ ANQWYHIAAT YENGNARVFV NGVAGTSGTV GAVSHMPVLR LGGLTSYGFF
AGQIDDVRIS RIVRYTGSFT PPSMPLPADA NTIALYLFDE GSGQTAYDAS GNGYHLTLGR
SAGVDSADPQ RVVSSAPGR
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