8 homologs were found in PanDaTox collection
for query gene Sde_3435 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3435  hypothetical protein  100 
 
 
154 aa  315  1e-85  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.0000186585 
 
 
-
 
NC_007912  Sde_3986  DNA polymerase III, beta chain  54.25 
 
 
154 aa  186  7e-47  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.563929 
 
 
-
 
NC_004347  SO_1513  hypothetical protein  31.37 
 
 
154 aa  80.1  0.000000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009727  CBUD_2127  hypothetical protein  24.84 
 
 
159 aa  54.7  0.0000004  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.869401  n/a   
 
 
-
 
NC_007912  Sde_1824  hypothetical protein  28.18 
 
 
173 aa  52.8  0.000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2019  hypothetical protein  27.21 
 
 
285 aa  48.5  0.00004  Marinobacter aquaeolei VT8  Bacteria  normal  0.0278407  n/a   
 
 
-
 
NC_010682  Rpic_1000  hypothetical protein  32.11 
 
 
152 aa  45.4  0.0003  Ralstonia pickettii 12J  Bacteria  normal  0.207524  normal  0.0679832 
 
 
-
 
NC_008781  Pnap_0024  hypothetical protein  23.93 
 
 
168 aa  43.5  0.001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.309029  normal  0.358699 
 
 
-
 
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