Gene Sde_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3986 
Symbol 
ID3967309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp5019267 
End bp5019731 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID637923083 
ProductDNA polymerase III, beta chain 
Protein accessionYP_529453 
Protein GI90023626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.563929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTT TATATATCGC AATAATTTTT CTTACATTAT CTGGCTGTGC TTCACTTGGT 
CCAGCTTTTA CGCAGCAAGA GTTTTCGTCT GCGGATAAAG CTCTAGTATA TTTTTACAGG
CCCTCTCGGT TCTTTCAAGG TGGGGGAGGC CCTGATGTAT ATATTAATGG CGTAAAGGCG
TTCAGAATGC ATAATGGATC TTATAGCCAC ATATCTCTCT CGCCGGGTAC GCATTTGATT
AGTCCTAAGA AACATTTTAA TTGGGGCTTG GATGTGATGG ACAAAAATAT AAATGTTGTT
GCAGGTAAAG TTTACTATCT TAGGATGGAT TTTTCTGATG CAGGAGCTTC TCCAATTATA
ATAGGCGGGG TCGGTACCGC AGATATCTCT GGCACAACGG TATTCAATAT CGTCGATAGT
AGTGTGGCTG AAGAAGAGAT TGTAAAAACA AAGCTTGTTC CGTAG
 
Protein sequence
MKALYIAIIF LTLSGCASLG PAFTQQEFSS ADKALVYFYR PSRFFQGGGG PDVYINGVKA 
FRMHNGSYSH ISLSPGTHLI SPKKHFNWGL DVMDKNINVV AGKVYYLRMD FSDAGASPII
IGGVGTADIS GTTVFNIVDS SVAEEEIVKT KLVP