10 homologs were found in PanDaTox collection
for query gene Rpic_1000 on replicon NC_010682
Organism: Ralstonia pickettii 12J



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010682  Rpic_1000  hypothetical protein  100 
 
 		 152 aa  303  4.0000000000000004e-82  Ralstonia pickettii 12J  Bacteria  normal  0.207524  normal  0.0679832 
 
 
-
 
NC_003296  RS04809  lipoprotein  64.58 
 
 		 155 aa  188  2e-47  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0539958  normal  1 
 
 
-
 
NC_013456  VEA_003308  hypothetical protein  28.03 
 
 		 154 aa  56.2  0.0000001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0387  hypothetical protein  25.34 
 
 		 152 aa  52.4  0.000002  Dechloromonas aromatica RCB  Bacteria  decreased coverage  8.98134e-17  normal  0.0138646 
 
 
-
 
NC_007954  Sden_0080  hypothetical protein  27.78 
 
 		 161 aa  51.6  0.000004  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_1482  hypothetical protein  24.82 
 
 		 140 aa  50.8  0.000007  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3416  hypothetical protein  24.8 
 
 		 146 aa  48.1  0.00005  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3295  hypothetical protein  23.97 
 
 		 147 aa  47.4  0.00008  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_3435  hypothetical protein  32.11 
 
 		 154 aa  45.4  0.0003  Saccharophagus degradans 2-40  Bacteria  normal  1  hitchhiker  0.0000186585 
 
 
-
 
NC_004347  SO_0994  hypothetical protein  24.79 
 
 		 146 aa  44.3  0.0007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>