Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0080 |
Symbol | |
ID | 4017128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 88680 |
End bp | 89165 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637954053 |
Product | hypothetical protein |
Protein accession | YP_561100 |
Protein GI | 91791449 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA TCTATTTGGC TTTATCGTTA ATCGCAGTTT CATTTTTCTC AGGTTGTGCT TCAGTACCTA TGGCATCGTC GGAGCAAGAC TCTGCGTTAA AGCAATTTCA ACAACCAAAA AATGGTAACG CGGGTTTATA TATTTATAGG AACTCATTCG TTGGCCAAGC TTTAAAAAAG AATGTTTATG TCAACGGGCA GCTCCTCGGT GAAACGGCAA ACAAGGTTTA CTTTTATAAA GAGTTAGCAC CCGGTAATCA CTCAATTTCC ACCGAGTCTG AATTTAGTGA AAACGATATC AACTTACCCG TTGAGGCTGG TCAGTTGTAT TTCGTTGAGC AGCACATAAA AATGGGCGTA TTCGTCGGTG GTGCCAGTTT AGAGCATGTT GATAATGCTA AAGGGATGGA CAATATTAAG CAATGTAAGT TGGCTAAAGC AACCGATCAA GTCGTCTACT TAAAAACTCC GGCCAATAAA CTCTAG
|
Protein sequence | MKNIYLALSL IAVSFFSGCA SVPMASSEQD SALKQFQQPK NGNAGLYIYR NSFVGQALKK NVYVNGQLLG ETANKVYFYK ELAPGNHSIS TESEFSENDI NLPVEAGQLY FVEQHIKMGV FVGGASLEHV DNAKGMDNIK QCKLAKATDQ VVYLKTPANK L
|
| |