Gene Sden_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0080 
Symbol 
ID4017128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp88680 
End bp89165 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content40% 
IMG OID637954053 
Producthypothetical protein 
Protein accessionYP_561100 
Protein GI91791449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TCTATTTGGC TTTATCGTTA ATCGCAGTTT CATTTTTCTC AGGTTGTGCT 
TCAGTACCTA TGGCATCGTC GGAGCAAGAC TCTGCGTTAA AGCAATTTCA ACAACCAAAA
AATGGTAACG CGGGTTTATA TATTTATAGG AACTCATTCG TTGGCCAAGC TTTAAAAAAG
AATGTTTATG TCAACGGGCA GCTCCTCGGT GAAACGGCAA ACAAGGTTTA CTTTTATAAA
GAGTTAGCAC CCGGTAATCA CTCAATTTCC ACCGAGTCTG AATTTAGTGA AAACGATATC
AACTTACCCG TTGAGGCTGG TCAGTTGTAT TTCGTTGAGC AGCACATAAA AATGGGCGTA
TTCGTCGGTG GTGCCAGTTT AGAGCATGTT GATAATGCTA AAGGGATGGA CAATATTAAG
CAATGTAAGT TGGCTAAAGC AACCGATCAA GTCGTCTACT TAAAAACTCC GGCCAATAAA
CTCTAG
 
Protein sequence
MKNIYLALSL IAVSFFSGCA SVPMASSEQD SALKQFQQPK NGNAGLYIYR NSFVGQALKK 
NVYVNGQLLG ETANKVYFYK ELAPGNHSIS TESEFSENDI NLPVEAGQLY FVEQHIKMGV
FVGGASLEHV DNAKGMDNIK QCKLAKATDQ VVYLKTPANK L