Gene Sde_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3435 
Symbol 
ID3966239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4374220 
End bp4374684 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content43% 
IMG OID637922532 
Producthypothetical protein 
Protein accessionYP_528902 
Protein GI90023075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000186585 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTATT TTATTTTGGT AATGGTGTAT CTAGTTGTTT CTGGTTGCGC TTCGCTAGGG 
CAAAAGTTTT CTGAGCCTAT GGCAGTAGAG CAAGATAAGG CATTGGTCTA TTTCTATCGT
CCTGCGAGGT TTTTCCAAGG TGGTGGAGGT CCTGATGTGT ATGTTAACGA AGTCAAAGAG
TTTCGGATGC ATAACGGCGG ATACGCATTT AGATATTTCA ATCCTGGTGA GTACACTATC
AGTACTAGAA AACACTTTAA TTGGGGGTTG GAAGGTGTCG ATAAGGCGGT TTCCCTGAAT
GCGGGAGAGG TCTATTATTT TCGAATGGAT TTTTCCGATT CTGGAGTTAA TGTTATTAGT
GTTGGTGGTT TCGCAACAGG GGAGGTGTCT GGGGTGGTCG CTTTTAATTT GATTGAAAAT
AGCGTAGCCA CCACCGAAAT CAAGGAAACT AGCCTTATTC AGTAG
 
Protein sequence
MKYFILVMVY LVVSGCASLG QKFSEPMAVE QDKALVYFYR PARFFQGGGG PDVYVNEVKE 
FRMHNGGYAF RYFNPGEYTI STRKHFNWGL EGVDKAVSLN AGEVYYFRMD FSDSGVNVIS
VGGFATGEVS GVVAFNLIEN SVATTEIKET SLIQ