Gene Rpic_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1000 
Symbol 
ID6288214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1058517 
End bp1058975 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID642624568 
Producthypothetical protein 
Protein accessionYP_001898580 
Protein GI187928093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.207524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0679832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAG TTTTGCGCGC ATTGGCTTCG GCCATCGGTG TCACGGTTCT GATGGCGGGT 
TGCGCGTCGG GCGTGAAGTA TTCCGAAATG GCTTCGTCGA TTCCGACGCT CAAGCAGGAT
CAAGGGCGCG TGTACTTCTT CCGCTCGTCG TCGCTGATCG GCGCGGCACT GCAGCCGGAC
ATCAAGCTGA ACAGCGAAGT GATTGGCCAA TCCAAACCGG GCGGCTTCTT CTTCGTTGAC
CGTCCGGCTG GCAAGTATGT CGTGTCAACA GCCACCGAGA CCGAGAAGAC GCTGAGCTTC
GCACTGGACG CCGGTGAGAC AAAGTACGTG CGCACGTCGC CGTCGCTGGG TCTGATTGTC
GGCCGCGTGG TGCCCGAGCT TGAAACGCCG GAAAAGGCGC AGGCCGAACT GCCCTCGTTG
AGCTTCGCGC CCAACGAGCC GCCGGTTGCC AAGAAGTAA
 
Protein sequence
MKGVLRALAS AIGVTVLMAG CASGVKYSEM ASSIPTLKQD QGRVYFFRSS SLIGAALQPD 
IKLNSEVIGQ SKPGGFFFVD RPAGKYVVST ATETEKTLSF ALDAGETKYV RTSPSLGLIV
GRVVPELETP EKAQAELPSL SFAPNEPPVA KK