16 homologs were found in PanDaTox collection
for query gene Rleg_2743 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012850  Rleg_2743  transcriptional regulator, AbrB family  100 
 
 
69 aa  146  1.0000000000000001e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.504039 
 
 
-
 
NC_011206  Lferr_1457  transcriptional regulator, AbrB family  75 
 
 
70 aa  112  2.0000000000000002e-24  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.203506  normal 
 
 
-
 
NC_011761  AFE_1781  transcriptional regulator, AbrB family  75 
 
 
70 aa  112  2.0000000000000002e-24  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.867819  n/a   
 
 
-
 
NC_007517  Gmet_1339  AbrB family transcriptional regulator  55.81 
 
 
89 aa  51.2  0.000004  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0175317 
 
 
-
 
NC_009483  Gura_1405  AbrB family transcriptional regulator  38.24 
 
 
68 aa  50.4  0.000007  Geobacter uraniireducens Rf4  Bacteria  normal  0.012105  n/a   
 
 
-
 
NC_009483  Gura_3494  AbrB family transcriptional regulator  44.9 
 
 
81 aa  50.1  0.00001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2861  AbrB family transcriptional regulator  36.76 
 
 
69 aa  50.1  0.00001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2526  transcriptional regulator, AbrB family  34.38 
 
 
68 aa  46.6  0.0001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0134949  n/a   
 
 
-
 
NC_011146  Gbem_1918  transcriptional regulator, AbrB family  44.19 
 
 
83 aa  45.8  0.0002  Geobacter bemidjiensis Bem  Bacteria  normal  0.170591  n/a   
 
 
-
 
NC_013169  Ksed_24980  looped-hinge helix DNA binding domain, AbrB family  42.11 
 
 
85 aa  45.8  0.0002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1535  transcriptional regulator, AbrB family  37.5 
 
 
68 aa  44.7  0.0005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0183976  hitchhiker  0.000553685 
 
 
-
 
NC_009483  Gura_3012  AbrB family transcriptional regulator  41.86 
 
 
83 aa  43.5  0.0008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3083  transcriptional regulator AbrB  38.78 
 
 
91 aa  43.1  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2558  transcriptional regulator, AbrB family  31.25 
 
 
68 aa  42.4  0.002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2545  AbrB family transcriptional regulator  40.91 
 
 
89 aa  40.8  0.007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2437  transcriptional regulator, AbrB family  33.85 
 
 
68 aa  40.4  0.008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.373301  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>