8 homologs were found in PanDaTox collection
for query gene Nwi_3083 on replicon NC_007406
Organism: Nitrobacter winogradskyi Nb-255



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007406  Nwi_3083  transcriptional regulator AbrB  100 
 
 
91 aa  183  8e-46  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2131  transcriptional regulator, AbrB family  42.17 
 
 
87 aa  70.1  0.000000000009  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1339  AbrB family transcriptional regulator  40 
 
 
89 aa  70.1  0.00000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0175317 
 
 
-
 
NC_007484  Noc_2545  AbrB family transcriptional regulator  39.24 
 
 
89 aa  57.8  0.00000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3274  AbrB family transcriptional regulator  38.89 
 
 
82 aa  57.8  0.00000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.146878 
 
 
-
 
NC_009483  Gura_3012  AbrB family transcriptional regulator  34.18 
 
 
83 aa  48.5  0.00003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1918  transcriptional regulator, AbrB family  35.44 
 
 
83 aa  48.1  0.00004  Geobacter bemidjiensis Bem  Bacteria  normal  0.170591  n/a   
 
 
-
 
NC_012850  Rleg_2743  transcriptional regulator, AbrB family  38.78 
 
 
69 aa  43.1  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.504039 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>