10 homologs were found in PanDaTox collection
for query gene Gbem_1918 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_1918  transcriptional regulator, AbrB family  100 
 
 		 83 aa  171  2.9999999999999996e-42  Geobacter bemidjiensis Bem  Bacteria  normal  0.170591  n/a   
 
 
-
 
NC_009483  Gura_3012  AbrB family transcriptional regulator  85.37 
 
 		 83 aa  149  1e-35  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_2545  AbrB family transcriptional regulator  49.33 
 
 		 89 aa  80.1  0.000000000000009  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1339  AbrB family transcriptional regulator  50 
 
 		 89 aa  79.7  0.00000000000001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0175317 
 
 
-
 
NC_010814  Glov_2131  transcriptional regulator, AbrB family  39.76 
 
 		 87 aa  61.6  0.000000003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_3274  AbrB family transcriptional regulator  37.33 
 
 		 82 aa  55.5  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.146878 
 
 
-
 
NC_007406  Nwi_3083  transcriptional regulator AbrB  35.44 
 
 		 91 aa  48.1  0.00004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_1457  transcriptional regulator, AbrB family  48.78 
 
 		 70 aa  47.8  0.00005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.203506  normal  1 
 
 
-
 
NC_011761  AFE_1781  transcriptional regulator, AbrB family  48.78 
 
 		 70 aa  47.8  0.00005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.867819  n/a   
 
 
-
 
NC_012850  Rleg_2743  transcriptional regulator, AbrB family  44.19 
 
 		 69 aa  45.8  0.0002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.504039 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>