Gene Ksed_24980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24980 
Symbol 
ID8374001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2577766 
End bp2578023 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content72% 
IMG OID644992724 
Productlooped-hinge helix DNA binding domain, AbrB family 
Protein accessionYP_003150227 
Protein GI256826267 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones105 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGG CGACGATGTC GAGCAAGGGG CAGGTGACCA TGCCCAAGGA GGTGCGTGAG 
GCGCTCCACC TTGCGACCGG GTCCCGCGTG GTCTTCGAGC CGGCCGGTGA GGGCGAGTAC
GTGGTACGGG CGGTGAGGGG CTCGGGCTCC TTGGCAGACC TGGCCGGGTG CCTTCCCCGG
CGGGGCGCCC CCGTGACCCT GGAGCAGATG GAACGGGCCG TGGCCGACGG TGCTGCTGCG
TCGGGGGCGT CCGGGTGA
 
Protein sequence
MVMATMSSKG QVTMPKEVRE ALHLATGSRV VFEPAGEGEY VVRAVRGSGS LADLAGCLPR 
RGAPVTLEQM ERAVADGAAA SGASG