11 homologs were found in PanDaTox collection
for query gene Ppha_2558 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011060  Ppha_2558  transcriptional regulator, AbrB family  100 
 
 		 68 aa  139  1.9999999999999998e-32  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1405  AbrB family transcriptional regulator  61.19 
 
 		 68 aa  90.1  1e-17  Geobacter uraniireducens Rf4  Bacteria  normal  0.012105  n/a   
 
 
-
 
NC_011901  Tgr7_2437  transcriptional regulator, AbrB family  57.35 
 
 		 68 aa  85.5  2e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.373301  n/a   
 
 
-
 
NC_013889  TK90_1535  transcriptional regulator, AbrB family  55.22 
 
 		 68 aa  84  7e-16  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0183976  hitchhiker  0.000553685 
 
 
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NC_010831  Cphamn1_1402  transcriptional regulator, AbrB family  56.06 
 
 		 68 aa  79.3  0.00000000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  hitchhiker  0.000475988 
 
 
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NC_009767  Rcas_2861  AbrB family transcriptional regulator  46.15 
 
 		 69 aa  74.3  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
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NC_011060  Ppha_2526  transcriptional regulator, AbrB family  46.27 
 
 		 68 aa  70.5  0.000000000008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0134949  n/a   
 
 
-
 
NC_009483  Gura_3494  AbrB family transcriptional regulator  38.46 
 
 		 81 aa  46.2  0.0002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_2206  AbrB family transcriptional regulator  39.39 
 
 		 80 aa  44.3  0.0006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
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NC_012850  Rleg_2743  transcriptional regulator, AbrB family  31.25 
 
 		 69 aa  42.4  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.504039 
 
 
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NC_009253  Dred_2425  AbrB family transcriptional regulator  42.55 
 
 		 81 aa  40.8  0.006  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
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