Gene Noc_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2206 
Symbol 
ID3705144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2549811 
End bp2550053 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content53% 
IMG OID637738682 
ProductAbrB family transcriptional regulator 
Protein accessionYP_344196 
Protein GI77165671 
COG category 
COG ID 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATA ATCTCGTAAC TTTGAGTTCA AAAAATCAAG TGGTCATTCC CCGTGCCGCC 
AGGGAAGCGC TGAAACTAAA ACCAGGTCAG CAACTGCTGG TTCTGGCGCG GGGAGATCAT
TTGGTCATGG TGCCGCGGCC GGAGGATTTC GTCGCTAAAC TGCGCGGTCT GCATCGAGAA
GTTTGGCCCC AGGAGAATGG CAAGAATTAC CTGGAAAAGG AGCGGGATGC CTGGGACGAT
TGA
 
Protein sequence
MTNNLVTLSS KNQVVIPRAA REALKLKPGQ QLLVLARGDH LVMVPRPEDF VAKLRGLHRE 
VWPQENGKNY LEKERDAWDD