9 homologs were found in PanDaTox collection
for query gene Cphamn1_1402 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010831  Cphamn1_1402  transcriptional regulator, AbrB family  100 
 
 
68 aa  136  1e-31  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.000475988 
 
 
-
 
NC_009483  Gura_1405  AbrB family transcriptional regulator  58.82 
 
 
68 aa  84  7e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.012105  n/a   
 
 
-
 
NC_011060  Ppha_2558  transcriptional regulator, AbrB family  56.06 
 
 
68 aa  79.3  0.00000000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1535  transcriptional regulator, AbrB family  60.34 
 
 
68 aa  72.8  0.000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0183976  hitchhiker  0.000553685 
 
 
-
 
NC_011901  Tgr7_2437  transcriptional regulator, AbrB family  48.33 
 
 
68 aa  66.2  0.0000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.373301  n/a   
 
 
-
 
NC_009767  Rcas_2861  AbrB family transcriptional regulator  45 
 
 
69 aa  65.1  0.0000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2526  transcriptional regulator, AbrB family  46.67 
 
 
68 aa  61.6  0.000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0134949  n/a   
 
 
-
 
NC_007484  Noc_2206  AbrB family transcriptional regulator  38.71 
 
 
80 aa  47.8  0.00006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3494  AbrB family transcriptional regulator  37.25 
 
 
81 aa  40.4  0.007  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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