19 homologs were found in PanDaTox collection
for query gene Rcas_2861 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_2861  AbrB family transcriptional regulator  100 
 
 		 69 aa  141  3e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_2437  transcriptional regulator, AbrB family  46.88 
 
 		 68 aa  76.3  0.0000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.373301  n/a   
 
 
-
 
NC_011060  Ppha_2558  transcriptional regulator, AbrB family  46.15 
 
 		 68 aa  74.3  0.0000000000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1405  AbrB family transcriptional regulator  46.97 
 
 		 68 aa  74.3  0.0000000000006  Geobacter uraniireducens Rf4  Bacteria  normal  0.012105  n/a   
 
 
-
 
NC_013889  TK90_1535  transcriptional regulator, AbrB family  50 
 
 		 68 aa  72.4  0.000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0183976  hitchhiker  0.000553685 
 
 
-
 
NC_011060  Ppha_2526  transcriptional regulator, AbrB family  43.94 
 
 		 68 aa  71.6  0.000000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0134949  n/a   
 
 
-
 
NC_010831  Cphamn1_1402  transcriptional regulator, AbrB family  45 
 
 		 68 aa  65.1  0.0000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  hitchhiker  0.000475988 
 
 
-
 
NC_011206  Lferr_1457  transcriptional regulator, AbrB family  39.39 
 
 		 70 aa  53.5  0.000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.203506  normal  1 
 
 
-
 
NC_011761  AFE_1781  transcriptional regulator, AbrB family  39.39 
 
 		 70 aa  53.5  0.000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.867819  n/a   
 
 
-
 
NC_012850  Rleg_2743  transcriptional regulator, AbrB family  36.76 
 
 		 69 aa  50.1  0.00001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.504039 
 
 
-
 
NC_009483  Gura_3494  AbrB family transcriptional regulator  37.88 
 
 		 81 aa  48.1  0.00004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2576  AbrB family transcriptional regulator  43.64 
 
 		 134 aa  47  0.00008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.514903  normal  1 
 
 
-
 
NC_007484  Noc_2206  AbrB family transcriptional regulator  40.62 
 
 		 80 aa  46.2  0.0001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2425  AbrB family transcriptional regulator  36.84 
 
 		 81 aa  43.1  0.001  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_2444  hypothetical protein  40.48 
 
 		 79 aa  43.1  0.001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_3606  Regulators of stationary/sporulation gene expression protein  50 
 
 		 102 aa  42.7  0.002  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_0170  AbrB family transcriptional regulator  41.86 
 
 		 105 aa  41.6  0.004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_1458  transcriptional regulator, AbrB family  42.11 
 
 		 74 aa  41.2  0.005  Chlorobium limicola DSM 245  Bacteria  normal  0.75174  n/a   
 
 
-
 
NC_007644  Moth_0253  AbrB family transcriptional regulator  39.71 
 
 		 85 aa  40.8  0.006  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>