12 homologs were found in PanDaTox collection
for query gene Rcas_1252 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_1252  hypothetical protein  100 
 
 
371 aa  739    Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0497  hypothetical protein  70.6 
 
 
368 aa  508  1e-143  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3940  hypothetical protein  41.76 
 
 
514 aa  231  2e-59  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.405869  n/a   
 
 
-
 
NC_009972  Haur_3616  hypothetical protein  43.32 
 
 
582 aa  192  8e-48  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.056741  n/a   
 
 
-
 
NC_011831  Cagg_0641  hypothetical protein  58.06 
 
 
449 aa  180  2.9999999999999997e-44  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0050  hypothetical protein  61.18 
 
 
446 aa  174  1.9999999999999998e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0359798  normal 
 
 
-
 
NC_009523  RoseRS_3312  hypothetical protein  54.75 
 
 
445 aa  172  6.999999999999999e-42  Roseiflexus sp. RS-1  Bacteria  normal  0.223061  normal 
 
 
-
 
NC_013093  Amir_6699  hypothetical protein  40.8 
 
 
415 aa  144  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1422  hypothetical protein  40.79 
 
 
443 aa  140  4.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.782382  normal  0.126171 
 
 
-
 
NC_013530  Xcel_1198  hypothetical protein  40.91 
 
 
272 aa  127  3e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0092  hypothetical protein  43.31 
 
 
485 aa  110  3e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0538311  normal 
 
 
-
 
NC_008148  Rxyl_1088  hypothetical protein  36.9 
 
 
310 aa  71.6  0.00000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.348315  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>