29 homologs were found in PanDaTox collection
for query gene RS01942 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003296  RS01942  hypothetical protein  100 
 
 		 282 aa  566  1e-160  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.344173 
 
 
-
 
NC_007651  BTH_I2952  hypothetical protein  70.59 
 
 		 321 aa  314  9e-85  Burkholderia thailandensis E264  Bacteria  normal  0.564384  n/a   
 
 
-
 
NC_009080  BMA10247_3153  D-alanyl-D-alanine carboxypeptidase family protein  70.59 
 
 		 283 aa  313  9.999999999999999e-85  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0910994  n/a   
 
 
-
 
NC_008836  BMA10229_A1719  D-alanyl-D-alanine carboxypeptidase family protein  70.59 
 
 		 283 aa  313  9.999999999999999e-85  Burkholderia mallei NCTC 10229  Bacteria  normal  0.655393  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0048  D-alanyl-D-alanine carboxypeptidase family protein  70.59 
 
 		 283 aa  313  9.999999999999999e-85  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA2824  hypothetical protein  70.59 
 
 		 321 aa  313  1.9999999999999998e-84  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_3647  D-alanyl-D-alanine carboxypeptidase family protein  70.59 
 
 		 321 aa  313  1.9999999999999998e-84  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0113294  n/a   
 
 
-
 
NC_009074  BURPS668_3623  D-alanyl-D-alanine carboxypeptidase family protein  70.59 
 
 		 321 aa  313  1.9999999999999998e-84  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_007434  BURPS1710b_3630  hypothetical protein  70.59 
 
 		 321 aa  313  1.9999999999999998e-84  Burkholderia pseudomallei 1710b  Bacteria  normal  0.922757  n/a   
 
 
-
 
NC_008542  Bcen2424_0486  peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins  62.18 
 
 		 281 aa  312  2.9999999999999996e-84  Burkholderia cenocepacia HI2424  Bacteria  normal  0.430323  n/a   
 
 
-
 
NC_008060  Bcen_2619  peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins  62.18 
 
 		 281 aa  312  2.9999999999999996e-84  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0314166  n/a   
 
 
-
 
NC_010508  Bcenmc03_0460  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  61.82 
 
 		 281 aa  312  4.999999999999999e-84  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_0421  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  61.09 
 
 		 281 aa  310  2e-83  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.646468 
 
 
-
 
NC_010676  Bphyt_4924  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  73.46 
 
 		 213 aa  308  8e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.178814 
 
 
-
 
NC_010084  Bmul_2906  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  67.09 
 
 		 281 aa  304  9.000000000000001e-82  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_0394  peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins  66.08 
 
 		 242 aa  302  5.000000000000001e-81  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_007510  Bcep18194_A3576  hypothetical protein  72.08 
 
 		 203 aa  286  2e-76  Burkholderia sp. 383  Bacteria  normal  1  normal  0.71393 
 
 
-
 
NC_007298  Daro_2191  hypothetical protein  50.18 
 
 		 282 aa  257  1e-67  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_05510  D-alanyl-D-alanine carboxypeptidase family  44.12 
 
 		 292 aa  202  6e-51  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.128539  n/a   
 
 
-
 
NC_010655  Amuc_1134  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  29.86 
 
 		 195 aa  52.4  0.000008  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.865984  normal  1 
 
 
-
 
NC_013412  GYMC61_3591  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  34.95 
 
 		 156 aa  52  0.00001  Geobacillus sp. Y412MC61  Bacteria  normal  0.0129413  n/a   
 
 
-
 
NC_011080  SNSL254_A2926  hypothetical protein  35.29 
 
 		 113 aa  50.1  0.00004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  hitchhiker  2.99493e-16 
 
 
-
 
NC_011083  SeHA_C3482  hypothetical protein  35.29 
 
 		 113 aa  50.1  0.00004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.739069  hitchhiker  0.0000000000000269752 
 
 
-
 
NC_011149  SeAg_B2790  hypothetical phage-related protein  35.29 
 
 		 113 aa  50.1  0.00004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_3868  hypothetical protein  34.44 
 
 		 575 aa  50.1  0.00004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.845697  normal  0.696464 
 
 
-
 
NC_011060  Ppha_2260  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  30 
 
 		 202 aa  45.8  0.0009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.0000253408  n/a   
 
 
-
 
NC_012794  GWCH70_3454  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  34 
 
 		 156 aa  45.4  0.001  Geobacillus sp. WCH70  Bacteria  normal  0.594088  normal  0.915098 
 
 
-
 
NC_010465  YPK_0907  hypothetical protein  34.65 
 
 		 128 aa  43.9  0.003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0233076  n/a   
 
 
-
 
NC_009718  Fnod_0036  cell wall biogenesis enzyme-like protein  29.46 
 
 		 146 aa  43.9  0.003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
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