Gene Amuc_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1134 
Symbol 
ID6273913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1357024 
End bp1357611 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content55% 
IMG OID642613186 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_001877741 
Protein GI187735629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.865984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA GCATTTCCGA CCTGCAGAAA GATACCTTCT ACTGGCAAAG GCTCTTGCGC 
CTGGCCGGGT ACTATCACGG AGCCATTGAC GGCATTCCCG GCAACGGCAC GCGGAACGGA
ACGGAACGCT GGAGCACGGA CGCCGACCGG TACAAAATGG AGACCGGATG CTTTGACGAA
CGCACCGAAC GGAACATCTC CACCCTTCTT CCGGAAGCGC AAAAAGCCGC CCGGCAGTGG
TTCAAACTGG CCCGGAATGA AGCCGCCAAC CAGGGATATG AAGCAAAAAT TATCTGCGGA
ACGCGCACGT ATGCCGAACA GAATGACCTC TACAGGCAAC GCCCTAAAGT AACGAATGCC
CGCGGCGGCC AGAGCTGGCA CAACTTCGGC CTGGCCTGGG ATTTTGGAAT TTTCCAGGAC
CGCAACTACC TGCCCAATCA CCCTCTTTAC ACCACTCTTG GCAAACTTTA CGCAAAAATT
GACGGCCTGG AGTGGGGAGG AACATGGAAA TCCTTTACAG ATCCGCCGCA TTTGCAGCTC
CATCAATTCG GAAGCATTTC CGAAGCGCGC AGAAGTTTCG AAACATGA
 
Protein sequence
MADSISDLQK DTFYWQRLLR LAGYYHGAID GIPGNGTRNG TERWSTDADR YKMETGCFDE 
RTERNISTLL PEAQKAARQW FKLARNEAAN QGYEAKIICG TRTYAEQNDL YRQRPKVTNA
RGGQSWHNFG LAWDFGIFQD RNYLPNHPLY TTLGKLYAKI DGLEWGGTWK SFTDPPHLQL
HQFGSISEAR RSFET