Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1134 |
Symbol | |
ID | 6273913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1357024 |
End bp | 1357611 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642613186 |
Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
Protein accession | YP_001877741 |
Protein GI | 187735629 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.865984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA GCATTTCCGA CCTGCAGAAA GATACCTTCT ACTGGCAAAG GCTCTTGCGC CTGGCCGGGT ACTATCACGG AGCCATTGAC GGCATTCCCG GCAACGGCAC GCGGAACGGA ACGGAACGCT GGAGCACGGA CGCCGACCGG TACAAAATGG AGACCGGATG CTTTGACGAA CGCACCGAAC GGAACATCTC CACCCTTCTT CCGGAAGCGC AAAAAGCCGC CCGGCAGTGG TTCAAACTGG CCCGGAATGA AGCCGCCAAC CAGGGATATG AAGCAAAAAT TATCTGCGGA ACGCGCACGT ATGCCGAACA GAATGACCTC TACAGGCAAC GCCCTAAAGT AACGAATGCC CGCGGCGGCC AGAGCTGGCA CAACTTCGGC CTGGCCTGGG ATTTTGGAAT TTTCCAGGAC CGCAACTACC TGCCCAATCA CCCTCTTTAC ACCACTCTTG GCAAACTTTA CGCAAAAATT GACGGCCTGG AGTGGGGAGG AACATGGAAA TCCTTTACAG ATCCGCCGCA TTTGCAGCTC CATCAATTCG GAAGCATTTC CGAAGCGCGC AGAAGTTTCG AAACATGA
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Protein sequence | MADSISDLQK DTFYWQRLLR LAGYYHGAID GIPGNGTRNG TERWSTDADR YKMETGCFDE RTERNISTLL PEAQKAARQW FKLARNEAAN QGYEAKIICG TRTYAEQNDL YRQRPKVTNA RGGQSWHNFG LAWDFGIFQD RNYLPNHPLY TTLGKLYAKI DGLEWGGTWK SFTDPPHLQL HQFGSISEAR RSFET
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