Gene Bamb_0394 details

Gene Information

• Locus tag: Bamb_0394
• ID: 4309775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 443920
• End bp: 444648
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638148182
• Product: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
• Protein accession: YP_772287
• Protein GI: 115350448

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGCC GCGCGAACGA TCGCGCCGCA CGCACGCGCA GTCAAATTGT TAAATCGGCA 
ACCGCGACGC GCGGCGCATT AAGTGGCGTG CAAAATTTAC TGGTTCGGCG GCGCTTGATG 
ATTATGGTGT CGGCAGGTAT TCTTGCGACG CCGCCATTGG TGGCCATTGC GTTACGCGGT 
CGGCAATTAT TTCAGTACGA CGACACGGCG CGCGTGCCAG ACGAGAAGAT CGCCGCGCTG 
CTGCAGGGCG AACAACTCGT GCCGCCGCCG CCGTTGCCGC CGGAAGTCTT TGCCACGAAG 
GAAGTCGAAC AGGTGCGGCC GGCGCTGAAG GATGCGAGCC GCGACTGGAA CCTGCTGGAT 
CCCGATTTCC GTACGCGTTT GCTGCTGGTC TACAAGATCA TGCACGAACA ATATGGTTAC 
GAGATGGCGC TGCTGGAAGG TTATCGGAGT CCGGAACGGC AGAACCGGCT CGCGCAGATG 
GGCACCAACG TGACCAATGC GGCGGCCTTC CAGAGTTACC ACCAGTTCGG GCTCGCGACG 
GACAACGCGT TCCTGCGCGA CGGCAAGCTG GTCATTTCCG AGAAAGATCC GTGGGCGATG 
CGCGGCTACC AGTTGTACGG CCAGGTTGCC GAGCAGGTCG GACTGACCTG GGGCGGCCGA 
TGGAAGATGA TGGATCTCGG GCACGTGGAA TACCATAAAC CCGGTTTTAA ACTGGGACGC 
GGCAGCTAG 

 

Protein sequence

MTRRANDRAA RTRSQIVKSA TATRGALSGV QNLLVRRRLM IMVSAGILAT PPLVAIALRG 
RQLFQYDDTA RVPDEKIAAL LQGEQLVPPP PLPPEVFATK EVEQVRPALK DASRDWNLLD 
PDFRTRLLLV YKIMHEQYGY EMALLEGYRS PERQNRLAQM GTNVTNAAAF QSYHQFGLAT 
DNAFLRDGKL VISEKDPWAM RGYQLYGQVA EQVGLTWGGR WKMMDLGHVE YHKPGFKLGR 
GS