9 homologs were found in PanDaTox collection
for query gene RPC_4486 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_4486  hypothetical protein  100 
 
 		 124 aa  256  8e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.271676  normal  0.111915 
 
 
-
 
NC_007964  Nham_2267  tetratricopeptide TPR_2  78.72 
 
 		 285 aa  152  1e-36  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3919  Tetratricopeptide TPR_2 repeat protein  54.26 
 
 		 495 aa  104  4e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000119733  n/a   
 
 
-
 
NC_010581  Bind_2736  tetratricopeptide TPR_2  56.99 
 
 		 269 aa  103  6e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.059738 
 
 
-
 
NC_007498  Pcar_1474  hypothetical protein  51.61 
 
 		 489 aa  95.5  2e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_009426  Saro_3973  hypothetical protein  47.87 
 
 		 290 aa  81.6  0.000000000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1731  tetratricopeptide TPR_2  49.47 
 
 		 287 aa  78.6  0.00000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.957092  n/a   
 
 
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NC_002967  TDE2741  hypothetical protein  36.61 
 
 		 259 aa  77.4  0.00000000000006  Treponema denticola ATCC 35405  Bacteria  normal  0.566816  n/a   
 
 
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NC_013946  Mrub_0159  Tetratricopeptide TPR_2 repeat protein  42.86 
 
 		 278 aa  64.3  0.0000000005  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
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