Gene RPC_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4486 
Symbol 
ID3972401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4995130 
End bp4995504 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content63% 
IMG OID637927597 
Producthypothetical protein 
Protein accessionYP_534328 
Protein GI90425958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.271676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.111915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATCC AGTCACCGAA TCGAGCCTAC CACGGGGAAA TCGGTAGGGA AGCCACGGCT 
GCCCACCTCA TGTACGACGC ATGGGGCGCC AGCGATCCGA AGCGCCGGAT CGCATTGGCG
AAAAAAGCGC TCGGACTATC TCCGCTCTGC GCCGACGCTT ATGTCCTGCT GGCGCAGGAA
ACCGCCAGCA ACTTGGATCA AGCAATCGAG CTCTATCGCC AAGGCGTCGA GGCCGGCGAA
ATGGCGCTCG GGAAGGCCGC GTTCCGCGAC GACGTCGGGC ATTTCTGGGG CTTGCTGGAA
ACCCGTCCGT ATATGCGCGC TCGCCACGGT CTTGCGCAGA CATCTGGGAG AAAGGCCTGC
GTGACGAGGC CGTGA
 
Protein sequence
MVIQSPNRAY HGEIGREATA AHLMYDAWGA SDPKRRIALA KKALGLSPLC ADAYVLLAQE 
TASNLDQAIE LYRQGVEAGE MALGKAAFRD DVGHFWGLLE TRPYMRARHG LAQTSGRKAC
VTRP