12 homologs were found in PanDaTox collection
for query gene Pput_4112 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009512  Pput_4112  hypothetical protein  100 
 
 		 314 aa  623  1e-177  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011353  ECH74115_2245  putative phage portal protein, HK97 family  41.55 
 
 		 859 aa  247  2e-64  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  hitchhiker  0.0000140812 
 
 
-
 
NC_009436  Ent638_2235  hypothetical protein  42.02 
 
 		 347 aa  239  4e-62  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_1773  hypothetical protein  50 
 
 		 355 aa  210  3e-53  Acidovorax citrulli AAC00-1  Bacteria  normal  0.457956  normal  1 
 
 
-
 
NC_011353  ECH74115_1540  putative phage portal protein, HK97 family  38.92 
 
 		 833 aa  204  2e-51  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.533039 
 
 
-
 
NC_011353  ECH74115_2891  putative phage portal protein, HK97 family  44.03 
 
 		 833 aa  201  9.999999999999999e-51  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  hitchhiker  0.0000639413 
 
 
-
 
NC_009667  Oant_0244  hypothetical protein  31.73 
 
 		 267 aa  80.5  0.00000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_5064  Collagen triple helix repeat protein  48.31 
 
 		 839 aa  73.2  0.000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.18046  n/a   
 
 
-
 
NC_011894  Mnod_4075  hypothetical protein  48.31 
 
 		 137 aa  72.4  0.000000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110261  n/a   
 
 
-
 
NC_011894  Mnod_2610  Collagen triple helix repeat protein  57.81 
 
 		 767 aa  70.5  0.00000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.965964  n/a   
 
 
-
 
NC_011894  Mnod_4285  Collagen triple helix repeat protein  48.81 
 
 		 648 aa  68.9  0.0000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.275713  n/a   
 
 
-
 
NC_007948  Bpro_0957  carbohydrate-binding family V/XII protein  56.82 
 
 		 105 aa  45.8  0.001  Polaromonas sp. JS666  Bacteria  normal  0.489217  normal  0.0612404 
 
 
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