Gene Pput_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4112 
Symbol 
ID5192185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4621485 
End bp4622429 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content59% 
IMG OID640588589 
Producthypothetical protein 
Protein accessionYP_001269420 
Protein GI148549318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCTGC GTGAACTCGA AGCACAGGCG AAAGCCCTCG CGCCGGTCTT GAAAGGCTAT 
GTCGACAAGG CCATCGCCTC TCTACGAGAG GCCCTGGGGA AGGACATTGA TCAACGGGAT
GAGGGGTTGC GCCGGGAGTT CGTCGAGTCA ATCGGCAAAA TTCCTATCCT CGACCCTAAG
GAAATCGCAG CCGAGGCTGC CCGACATATC GCAGTCCCGG AAAATGGTAA GGATGCCGAT
CCCGAAATGG TCCGGCAGGC CGTGGCCGAA GAGGTTGCCA AGCTTCCTGT CCCCCGGGAT
GGCGTGTCTA TCACGTTGGA AGACGTTGCC CCGATGTTGA TTGATGCGGT GAAGGAGGCT
GTCGACGCGC TTCCACCAGC AGAGCCTGGG GCCAGCGTTA CACCGGAAGA TCTACGGCCG
GTCATTGCCG AAGAGGTTGC GAAGGCGATG CAGGGCCTGG TTCTTCCGAA AGACGGCGAG
CCCGGACGTG ATGCACTGCA GCTTGAGATA CTGCCGGAGA TAGACGGCGA GAAGTCCTAT
GTGCGTGGGA CCTACGCCAA GCATCTCGGC GGACTGTGGC GCTCGTTCGA GCGAACCAGT
GGCATGAAGG GGTGGGAGTG CATTGTTGAG GGGGTTGGCT CTGCTGTAGT CGAACAGACT
GGTGAGCGAG GTTTCGAGCT GTCGCTGGTG CTTTCCAGTG GTGCTGAGGT ACGTAAGAAG
CTTGATTTAC CGGTGATGAT CTACCGTGGG GTGTTTTCTC CCGGAGATTA TCTGCCCGGG
GACACCGTCA CATGGGCTGG AAGCCTTTGG CATTGCGAAG ATCCGACCAG CGACAAGCCG
GGAGAGCCCG CCAGCAAGGG GTGGCGCCTG GCGGTCAAGC GAGGCAGGGA TGGCAAAGAC
GGGACCAATG GTAAAGACCT GACCAAGGGG GTGTCGGCAT CATGA
 
Protein sequence
MNLRELEAQA KALAPVLKGY VDKAIASLRE ALGKDIDQRD EGLRREFVES IGKIPILDPK 
EIAAEAARHI AVPENGKDAD PEMVRQAVAE EVAKLPVPRD GVSITLEDVA PMLIDAVKEA
VDALPPAEPG ASVTPEDLRP VIAEEVAKAM QGLVLPKDGE PGRDALQLEI LPEIDGEKSY
VRGTYAKHLG GLWRSFERTS GMKGWECIVE GVGSAVVEQT GERGFELSLV LSSGAEVRKK
LDLPVMIYRG VFSPGDYLPG DTVTWAGSLW HCEDPTSDKP GEPASKGWRL AVKRGRDGKD
GTNGKDLTKG VSAS