| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2610 |
|---|
| Symbol | |
|---|
| ID | 7305144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 2695657 |
|---|
| End bp | 2697960 |
|---|
| Gene Length | 2304 bp |
|---|
| Protein Length | 767 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643600329 |
|---|
| Product | Collagen triple helix repeat protein |
|---|
| Protein accession | YP_002497876 |
|---|
| Protein GI | 220922574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.965964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGG CTGACCGGCT CGCGGAGGCG GTGTTTCGCG CGGTGGAGGG CTATCTCGCC
CGGACGGTGG GGCCGCTGCT CGCCCGGCTC GAGGCGCTGG AGAGGCGGGA GCCTCGGCGC
GGCGAGCGGG GTCACAATGG CCAGCCGGGC CGCGGCCTCG CGAAGGCCAT CGTCACCGCG
GATGGCCTGC TCGTCCTGAC GATGACGACG GGCGAGGAGC TCAGCGTCGG CCGCGTGACA
GGCAAGGACG GCAAGGACGG GGCCGATGGC GCGCCCGGCC GGGACGGCCG CGATGGGGTC
GACGGCGCGC CGGGCGAGCC GGGCCGCGAT GGCACGGATG GGGCGGATGG TCGGGACGGC
CGCGACTTCG ATCCGGAGCT TCTCCGCACC GCGGTGGTCG AGGAGGTATC CAAGGCGGTC
GACGCTATCC CGAGGCCGCG GGACGGTGCG CCTGGGCGCG ACGGCACGGA CGGGAAGGAC
GGACGGGATG GCAAGGACTT CGATCCCGCG GCCATGACGG CCGCTGTCGA GCAGGCCGTC
ACGAAGGCCC TCAGCCAGAT CCCTGTTCCG AAGGACGGGA CGCCGGGCCG GGACGGCAGG
GATGGCGTCG GCGTTGCGGG CGCCCTGATC GACCGCAGCG GCCATCTCGT CCTCACCCTG
TCGAACGGCG AGACCCGCGA TCTCGGCAGC GTGGTCGGCC GGGACGGCAA AGATGGCGAG
CCTGGACGTG ATGGCGCTCG TGGCGAGCGA GGAGAGCCGG GTCGAGACGG TAAGGACGGG
GCCGATGGTC GGGATGGCCA GGACTTCGAT CCGGACCTGC TGCGTTCCGC GGTTGCCGAG
GAGGTCTCCA AGGCGGTTGC AGCCATCCCG CAGCCGAAGG ACGGCGCGCC CGGGCGAGAT
GGGAGGGACG GAAAGGACTT CGATCCCGAG GTGCTCGCGG CCGCTGTCGA GCGTGCCGTC
ACGCAGGCGG TCGGTCGGAT CCCCGTTCCG AAGGACGGCG CGCCGGGCCG GGACGGCGCA
GATGGGGTCG GTGTTGCTGA CGCCCTCATC GACCGGACTG GCAAGCTTGT CGTCACGCTG
ACGAATGGCG AGACCCGTGA TCTTGGCTTG GTGGTTGGCC GAGATGGCAA GGACGGTGCC
GACGGCCGCG ATGGCCGGGA CGGCGCTCCC GGTGAGCGTG GCGAACAAGG AGAACCAGGT
CGCGATGGCA AGGATGGCAC CGACGGTCGG GATGGCCAGG ACGTCGAACC GGAGGCCCTG
CGGATCGCTG TCGAGGAGGC GGTCACGCAG GCCGTCAGCC AGATCCCGCT CCCGAAGGAC
GGGGCGCCCG GCCGGGACGG TCGCGACGGC GTGGACGGCA AGGACGGCGT CGGCCTCGCC
GATGCTCTGA TCGATCGCTC CGGCAACCTC GTGGTCACGC TGTCGAACGG CGACACCAAG
CAGCTTGGCC TCGTGGTCGG CCGGGACGGC AAGGATGGCC GGGCCGGCAG CGCCGGCAAG
GATGGTGCGC CGGGCCCGCG CGGTGAGCAG GGACCGCCCG GGGAGAAGGG CGAGCCGGGT
CCTTCTGGCG AGCGCGGAGA GCGTGGCGAC CAGGGCCGGC CGGGCGAGCG CGGGCCACAA
GGTGAGCGCG GCCTGCCGGG CGAGCCCGGC GCTGCGGGTG AGCAGGGTCC GCCCGGTGAG
CGCGGTGAAC AGGGACCGCC CGGCGATCAA GGAGAGCGTG GCGAGCCCGG CGAGCAGGGG
CCTCCAGGCG AGCGGGGCGG ACGGGGGCCG CAGGGCGAGC CGGGTCCTCC CGGTGAGCGG
GGCGAGCGCG GTGAGCCCGG AGAGCGTGGC GAGCGCGGTG AACCTGGCCC GGCCGGCGAG
CGCGGCGAGC CGGGCCCGCC CGGAGAGAAG GGCGAGCAGG GGCCTCCTGG TGAGACGGGC
GAGCGCGGTG AGCCGGGGGC TCCTGGTGAG CGCGGCGCCG ATGGCTTCGG CTTCGAGGAT
ATGGAGGAGG AGCTCGCCGG CGATGGGCGG ACCCTCATCC GGCGCTACCG CCGCGGCGAG
GAGGTGAAGG AGTTCCGCCA CCGCGTCCCG ACGGTGATCG ATCGCGGCGT CTACAAGGCG
GGCACGACCT ACCAGCCCGG CGACGGCGTC ACCTGGGCCG GCTCGTTCTG GATCGCTCAG
GCCGAGACGA GTTCGAAGCC GGATGGCGGC GAGGGCTGGC GCTTGGCGGT CAAGCGCGGC
CGCGATGGCA AGGACGGCAA GCCGGGCGAG CGCGGGCCCG AGGGCAAGGC CGGCCCGCCC
GGCCGCGACC CAACTCGGCC CTGA
|
|---|
| Protein sequence | MDEADRLAEA VFRAVEGYLA RTVGPLLARL EALERREPRR GERGHNGQPG RGLAKAIVTA
DGLLVLTMTT GEELSVGRVT GKDGKDGADG APGRDGRDGV DGAPGEPGRD GTDGADGRDG
RDFDPELLRT AVVEEVSKAV DAIPRPRDGA PGRDGTDGKD GRDGKDFDPA AMTAAVEQAV
TKALSQIPVP KDGTPGRDGR DGVGVAGALI DRSGHLVLTL SNGETRDLGS VVGRDGKDGE
PGRDGARGER GEPGRDGKDG ADGRDGQDFD PDLLRSAVAE EVSKAVAAIP QPKDGAPGRD
GRDGKDFDPE VLAAAVERAV TQAVGRIPVP KDGAPGRDGA DGVGVADALI DRTGKLVVTL
TNGETRDLGL VVGRDGKDGA DGRDGRDGAP GERGEQGEPG RDGKDGTDGR DGQDVEPEAL
RIAVEEAVTQ AVSQIPLPKD GAPGRDGRDG VDGKDGVGLA DALIDRSGNL VVTLSNGDTK
QLGLVVGRDG KDGRAGSAGK DGAPGPRGEQ GPPGEKGEPG PSGERGERGD QGRPGERGPQ
GERGLPGEPG AAGEQGPPGE RGEQGPPGDQ GERGEPGEQG PPGERGGRGP QGEPGPPGER
GERGEPGERG ERGEPGPAGE RGEPGPPGEK GEQGPPGETG ERGEPGAPGE RGADGFGFED
MEEELAGDGR TLIRRYRRGE EVKEFRHRVP TVIDRGVYKA GTTYQPGDGV TWAGSFWIAQ
AETSSKPDGG EGWRLAVKRG RDGKDGKPGE RGPEGKAGPP GRDPTRP
|
|---|
| |