| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5064 |
|---|
| Symbol | |
|---|
| ID | 7303757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 5138458 |
|---|
| End bp | 5140977 |
|---|
| Gene Length | 2520 bp |
|---|
| Protein Length | 839 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643602694 |
|---|
| Product | Collagen triple helix repeat protein |
|---|
| Protein accession | YP_002500213 |
|---|
| Protein GI | 220924911 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.18046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATG CTGAGCTTCT GGCAGAGGCG GTCTTCAAGT CTGTCGAGGG CTATCTGGCC
AAGACCCTTG CGCCCCTGCT CGCCCGGCTC GAGGCGCTGG AGAAGCGGCA GCCGGAGCGC
GGTGAGCGAG GTGAACCCGG GATGCCGGGC CGCGGCATCG CGGAGGCCCT CATCACCGAG
GACGGCATTC TCGTCCTGAC GATGACGACC GGCGAGGAGC GCAGGGTCGG CCGCGTGCGA
GGCCGGGACG GCAAGGACGG GGCCGACGGA CGCCCGGGCC AGGATGGTCG CGACGGTGTC
GACGGCGCGC CGGGCGAGCC GGGCCGCGAT GGCAAGGATG GGACTGATGG TCGGGACGGC
CGCGACTTCG ATCCGGAGCT TCTCCGCACC GCGGTGGTCG AAGAGGTGAC CCGGGCGGTG
GAGGCCATCC CGAAGCCGCA GGATGGCGCG CCAGGGCGCG ACGGTCGGGA CGGCCAGGAT
GTCGACCCCG CCGCCATGAC GGCCGCGGTC GAGGAGGCGG TCACGCGGGC CGTCAGCCAA
ATCCCGGTCC CGAAGGACGG AGCGCCCGGC CGGGACGGCG TCGGTGTCGC GGGCGCCCTC
ATCGACCGCA GCGGCCATCT CGTCCTTACC CTGTCGAACG GTGAGACCCG CGATCTCGGC
AGCGTGGCCG GCCGGGACGG CCAAGATGGC GCTCCTGGCG CTCGTGGCGA GCGAGGAGAG
CCGGGTCGAG ACGGTAAGGA CGGGGCCGAT GGTCGGGATG GCCGCGACGG CCAGGACTTT
GACCCGGACC TGCTGCGTTC CGCGGTTGCC GAGGCGGTCT CCAGAGTGGT CGCAGCCATC
CCGCAGCCGA AGGACGGGGC GCCCGGGCGA GATGGGAGGG ACGGCCAGGA CTTCGATCCC
GAGGTGCTCG CGGCCGCTGT CGAGCGAGCC GTCACGCAGG CAGTCGATCA GATCCCTGTT
CCGAGGGACG GCGCGCCCAG CCGGGACGGC GCAGATGGGG TCGGTGTTGC AGACGCCCTG
ATCGACCGGA GCGGCAAGCT CATCCTGACG CTGTCGAATG GCGAGGTCCG GGATCTCGGC
CTGGTGGTCG GCCGGGACGG AAAGGACGGT GCCGACGGCC GCGACGGCGC TCCTGGTGAG
CGTGGCGAAC AAGGAGAGCC AGGCCGCGAT GGGAAGGATG GCACCGACGG TCGCGACGGT
CAGGACGTCG ATCCGGACCT GCTGCGCGCT GCTGTTGCGG AGGCGGTCGC CAGTGCCGTC
GACGCTCTCC CGAAGCCGCA GGATGGCGCG CCGGGGCGCG ACGGCCGCGA CGGAAAGGAC
GTCGACCCGG AAGTTCTACG GACCGCCGTC GAGGAGGCGG TCACGACGGC CGTCAGCCAG
ATCCCGCTCC CGAAGGACGG GGCGCCCGGC CGGGACGGTC GAGACGGCGT GGACGGCAAG
GACGGCGTTG GCCTCGCCGA TGCTCTGATC GATCGCTCCG GCAATCTCGT CGTCACGCTG
TCGAACGGCG AGACCAAGCA GCTCGGCGTC GTGGTCGGCC GGGACGGCAG CGACGGCAAG
GATGGTGCGC CGGGCGAGCG GGGAGAGCCG GGCCCGCAGG GTGAGCGGGG TGAGCAGGGC
CCGCCCGGTC CGCAGGGCGA GCGAGGCGAG AAAGGCGAGC CCGGTGAGCA GGGCCCCGCT
GGCGAGCAAG GCCCGCCGGG TGAGCAGGGA CCTGCCGGCG AGCCCGGCGC TCCGGGTGAG
CAGGGTCCGC CCGGTGGGCG CGGCGAACAG GGACCGCCCG GCGAGCGTGG GGAGCGTGGA
GAGCCCGGCG AGCCGGGGCC GCCGGGCGAG CGGGGCGAAC CGGGTCCCGC CGGCGAGCCG
GGCCCTCCCG GTGAGCGGGG CGAGCCCGGC GAGCAAGGCC CTCCTGGCGA GCGCGGTGAG
CAGGGTCCGC GGGGCGAGCG CGGAGAACAG GGGCCGCCCG GTGAGCGGGG CGAGTGCGGC
GAGCAGGGCC CGCCCGGGGA GAAGGGCGAG CAGGGTCCTC CCGGCGAGCA GGGCCCCCCT
GGAGAGCGCG GTGAGAAGGG CGACCCGGGC CGCGACGGAG AGGACGGCGC TCCTGGGGCC
GCCGGAGAAC GCGGCGAACG GGGCGAGAAG GGCGACCCGG GTGAGCGCGG CGCCGACGGC
TTCGGCTTCG AGCACATGGA GGAGGAGCTC GCCGAGGACG GCCGCACCCT TGTGCGGCGC
TACCGCCGCG GCGAGGAGGT GAAGGAGTTC CGCCACCGCG TCCCGACGGT GATCGATCGC
GGCGTCTACA AGGCGGGCCA GATCTACCAG CCGGGCGACG GCGTCACCTG GGCGGGCTCG
TTCTGGATCG CCCAGGCCGA GACGAGTTCG AAGCCCGACA GCGGCGAGGG CTGGCGCCTC
GCGGTCAAGC GCGGGCGCGA TGGGCGTGAT GGCAAGGACG GTGCCCCCGG GCCCCAGGGC
AAGGAAGGGC CACCCGGTCG CGATCTGACC CAGCTCGGCC CTGACGGCAG CAAGTGGTGA
|
|---|
| Protein sequence | MRDAELLAEA VFKSVEGYLA KTLAPLLARL EALEKRQPER GERGEPGMPG RGIAEALITE
DGILVLTMTT GEERRVGRVR GRDGKDGADG RPGQDGRDGV DGAPGEPGRD GKDGTDGRDG
RDFDPELLRT AVVEEVTRAV EAIPKPQDGA PGRDGRDGQD VDPAAMTAAV EEAVTRAVSQ
IPVPKDGAPG RDGVGVAGAL IDRSGHLVLT LSNGETRDLG SVAGRDGQDG APGARGERGE
PGRDGKDGAD GRDGRDGQDF DPDLLRSAVA EAVSRVVAAI PQPKDGAPGR DGRDGQDFDP
EVLAAAVERA VTQAVDQIPV PRDGAPSRDG ADGVGVADAL IDRSGKLILT LSNGEVRDLG
LVVGRDGKDG ADGRDGAPGE RGEQGEPGRD GKDGTDGRDG QDVDPDLLRA AVAEAVASAV
DALPKPQDGA PGRDGRDGKD VDPEVLRTAV EEAVTTAVSQ IPLPKDGAPG RDGRDGVDGK
DGVGLADALI DRSGNLVVTL SNGETKQLGV VVGRDGSDGK DGAPGERGEP GPQGERGEQG
PPGPQGERGE KGEPGEQGPA GEQGPPGEQG PAGEPGAPGE QGPPGGRGEQ GPPGERGERG
EPGEPGPPGE RGEPGPAGEP GPPGERGEPG EQGPPGERGE QGPRGERGEQ GPPGERGECG
EQGPPGEKGE QGPPGEQGPP GERGEKGDPG RDGEDGAPGA AGERGERGEK GDPGERGADG
FGFEHMEEEL AEDGRTLVRR YRRGEEVKEF RHRVPTVIDR GVYKAGQIYQ PGDGVTWAGS
FWIAQAETSS KPDSGEGWRL AVKRGRDGRD GKDGAPGPQG KEGPPGRDLT QLGPDGSKW
|
|---|
| |