10 homologs were found in PanDaTox collection
for query gene Ppha_1288 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_1288  YapH protein  100 
 
 
175 aa  340  5.999999999999999e-93  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1284  hypothetical protein  40.11 
 
 
171 aa  99  3e-20  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1292  hypothetical protein  40.98 
 
 
166 aa  85.9  2e-16  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0495073  n/a   
 
 
-
 
NC_011060  Ppha_1286  YapH protein  38.51 
 
 
168 aa  75.1  0.0000000000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1753  YapH protein  37.99 
 
 
179 aa  74.3  0.0000000000008  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1758  hypothetical protein  37.84 
 
 
180 aa  73.9  0.000000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_10353  hypothetical protein  33.75 
 
 
180 aa  54.7  0.0000007  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1216  hypothetical protein  30.41 
 
 
175 aa  47.8  0.00008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4914  YapH protein  35.71 
 
 
170 aa  45.1  0.0005  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00218477  normal  0.159647 
 
 
-
 
NC_008048  Sala_2317  hypothetical protein  31.58 
 
 
186 aa  42  0.005  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.670509  normal 
 
 
-
 
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