Gene Cpin_4914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4914 
Symbol 
ID8361090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6141091 
End bp6141603 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content50% 
IMG OID644967063 
ProductYapH protein 
Protein accessionYP_003124548 
Protein GI256423895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00218477 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.159647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA CACGACTGCT TTTCGTTGCT TCGTTTGCAT TGGCATGCGC GGCAACAACA 
GCGCGGGCAC AGGAGACGGC ATCTGCTACG GTGACGGCGA CTATTGTCAC GCCCATCAGC
ATCACCAAAG ATGTTGATAT GAACTTCGGT AATGTAGCCG TTCGATCCTC CGCAGGTGGT
ACGGTTGTAC TGACACCTGC CGGTACGCGT ACCACCACCG GCGGTGTAAC ATTACCAACT
ACTGCCGGAA CAGTAACAGC AGCTTCATTT ACGGTAAACG GTACATCTGG TTATACGTAT
GTCATTACGT TACCTACGAC GCCGTTAACC ATTACCAGTG GCGCTAACAC GATGACAGTA
ACAGCCTTTA CCAGCGATCC TTCCGGTACA GGTACGCTGA CCGGTGGCAC ACAGGTACTT
AATGTAGGCG CTACACTGAA CGTCAGTGCT GCACAACCTG CTGGTCAGTA TGTATCCGGT
ACCCCATTCA ATGTTACTGT TAACTATAAC TAA
 
Protein sequence
MKRTRLLFVA SFALACAATT ARAQETASAT VTATIVTPIS ITKDVDMNFG NVAVRSSAGG 
TVVLTPAGTR TTTGGVTLPT TAGTVTAASF TVNGTSGYTY VITLPTTPLT ITSGANTMTV
TAFTSDPSGT GTLTGGTQVL NVGATLNVSA AQPAGQYVSG TPFNVTVNYN