Gene Ppha_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1288 
Symbol 
ID6463695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1350106 
End bp1350633 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID642727529 
ProductYapH protein 
Protein accessionYP_002018170 
Protein GI194336376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA GAATTTTGGC ACTCGTCGGT ATGGCTGCTT TGCTTGCTTC AGGGTCCAAT 
GCCTATGCTG CAACAGGCCA TGCAACAGCA ACAATTGCGG GTGCGCTCAC GGTTTCACAG
GATGCAGATG GAGTGAATGG TGGCGTTCTA ACCTTTGGAC ACATTATTCC CGATGCAGAA
ACACCAGGAA CAGTTACGGT TGCTGCAAGT GGAACGAATG ACTCTTTTGC TGTAACGGTG
ACCACTCAGA TAACACAGAG TCCAGCTCAA TTTGCTGTCT CAGGTGATAG TGGTACAGGT
TATTCTGTAA CTTTACCAGG TGCTGCAACT CTCCATAAAA CTGGTGCTCT TGTTATTACT
GACATGGCAG TTACAAACTT TACCAGTAAC TTGATCGACA ATAAAGGTAC GCTGAGTGAT
CCTGCCGGTC AAGGAACTTT CAAGGTTGGC GCAAAACTGG CTGTCGCTGC AGCTCAGCCT
TCAGGGGTCT ACAATGGCAC TTTTGATGTA ACTGTATTAT ACCAATAA
 
Protein sequence
MKKRILALVG MAALLASGSN AYAATGHATA TIAGALTVSQ DADGVNGGVL TFGHIIPDAE 
TPGTVTVAAS GTNDSFAVTV TTQITQSPAQ FAVSGDSGTG YSVTLPGAAT LHKTGALVIT
DMAVTNFTSN LIDNKGTLSD PAGQGTFKVG AKLAVAAAQP SGVYNGTFDV TVLYQ