11 homologs were found in PanDaTox collection
for query gene Ppha_1292 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_1292  hypothetical protein  100 
 
 
166 aa  329  8e-90  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0495073  n/a   
 
 
-
 
NC_011060  Ppha_1288  YapH protein  40.98 
 
 
175 aa  85.9  2e-16  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1758  hypothetical protein  31.25 
 
 
180 aa  70.5  0.00000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1286  YapH protein  38.24 
 
 
168 aa  68.6  0.00000000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1284  hypothetical protein  32.95 
 
 
171 aa  64.3  0.0000000007  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2858  hypothetical protein  37.23 
 
 
165 aa  61.6  0.000000005  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.347157 
 
 
-
 
NC_008639  Cpha266_1753  YapH protein  32.56 
 
 
179 aa  58.2  0.00000005  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_10353  hypothetical protein  33.33 
 
 
180 aa  50.1  0.00001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2317  hypothetical protein  28.57 
 
 
186 aa  47.8  0.00007  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.670509  normal 
 
 
-
 
NC_007794  Saro_1216  hypothetical protein  31.14 
 
 
175 aa  42.4  0.003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0450  hypothetical protein  29.48 
 
 
158 aa  42  0.004  Elusimicrobium minutum Pei191  Bacteria  decreased coverage  0.00000000742352  hitchhiker  0.00000000466691 
 
 
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